Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PACS1Q6VY07 AF106564.1-201ENST00000607058 2553 ntBASIC21.47■■□□□ 1.03
PACS1Q6VY07 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.47■■□□□ 1.03
PACS1Q6VY07 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PACS1Q6VY07 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PACS1Q6VY07 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PACS1Q6VY07 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PACS1Q6VY07 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PACS1Q6VY07 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
PACS1Q6VY07 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PACS1Q6VY07 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PACS1Q6VY07 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PACS1Q6VY07 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PACS1Q6VY07 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.45■■□□□ 1.02
PACS1Q6VY07 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PACS1Q6VY07 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PACS1Q6VY07 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PACS1Q6VY07 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.45■■□□□ 1.02
PACS1Q6VY07 AC104564.3-201ENST00000582367 638 ntBASIC21.45■■□□□ 1.02
PACS1Q6VY07 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.45■■□□□ 1.02
PACS1Q6VY07 AC005837.3-201ENST00000612163 286 ntBASIC21.45■■□□□ 1.02
PACS1Q6VY07 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PACS1Q6VY07 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.45■■□□□ 1.02
PACS1Q6VY07 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PACS1Q6VY07 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.45■■□□□ 1.02
PACS1Q6VY07 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PACS1Q6VY07 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PACS1Q6VY07 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.44■■□□□ 1.02
PACS1Q6VY07 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 AC142381.2-201ENST00000566120 298 ntBASIC21.43■■□□□ 1.02
PACS1Q6VY07 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PACS1Q6VY07 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
PACS1Q6VY07 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.42■■□□□ 1.02
PACS1Q6VY07 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PACS1Q6VY07 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PACS1Q6VY07 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PACS1Q6VY07 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
PACS1Q6VY07 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.42■■□□□ 1.02
PACS1Q6VY07 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PACS1Q6VY07 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.42■■□□□ 1.02
PACS1Q6VY07 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PACS1Q6VY07 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PACS1Q6VY07 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 TSPY26P-201ENST00000476365 1326 ntBASIC21.41■■□□□ 1.02
PACS1Q6VY07 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PACS1Q6VY07 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PACS1Q6VY07 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PACS1Q6VY07 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PACS1Q6VY07 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.4■■□□□ 1.02
PACS1Q6VY07 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PACS1Q6VY07 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PACS1Q6VY07 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PACS1Q6VY07 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PACS1Q6VY07 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PACS1Q6VY07 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.39■■□□□ 1.02
PACS1Q6VY07 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.39■■□□□ 1.02
PACS1Q6VY07 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms