Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 AC091305.1-201ENST00000479476 895 ntBASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 AC005837.3-201ENST00000612163 286 ntBASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRFN4Q6PJG9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 FAM99A-202ENST00000538190 1989 ntBASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 AL137060.1-201ENST00000618151 2648 ntBASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRFN4Q6PJG9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 TSPY26P-201ENST00000476365 1326 ntBASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 SMUG1P1-201ENST00000590640 811 ntBASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRFN4Q6PJG9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRFN4Q6PJG9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 MIR638-201ENST00000385237 100 ntBASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 AC142381.2-201ENST00000566120 298 ntBASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.03■□□□□ 0.64
LRFN4Q6PJG9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.02■□□□□ 0.64
LRFN4Q6PJG9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRFN4Q6PJG9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN4Q6PJG9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRFN4Q6PJG9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRFN4Q6PJG9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRFN4Q6PJG9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms