Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXR1Q6PIV2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXR1Q6PIV2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 AC244015.2-201ENST00000616358 1861 ntBASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXR1Q6PIV2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.02■■□□□ 1.11
FOXR1Q6PIV2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
FOXR1Q6PIV2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.11
FOXR1Q6PIV2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 AP001330.3-201ENST00000520123 633 ntBASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 MIR4767-201ENST00000582827 78 ntBASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 FEM1AP4-201ENST00000443167 1987 ntBASIC22.01■■□□□ 1.11
FOXR1Q6PIV2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
FOXR1Q6PIV2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
FOXR1Q6PIV2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXR1Q6PIV2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22■■□□□ 1.11
FOXR1Q6PIV2 MIR939-201ENST00000401314 82 ntBASIC22■■□□□ 1.11
FOXR1Q6PIV2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXR1Q6PIV2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22■■□□□ 1.11
FOXR1Q6PIV2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXR1Q6PIV2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXR1Q6PIV2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 AC092171.4-201ENST00000609130 632 ntBASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXR1Q6PIV2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXR1Q6PIV2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 AFG3L1P-217ENST00000557444 2447 ntBASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXR1Q6PIV2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms