Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 AC079089.2-201ENST00000531211 1277 ntBASIC22.26■■□□□ 1.15
RNF43Q68DV7 KRT18P61-201ENST00000585825 1298 ntBASIC22.26■■□□□ 1.15
RNF43Q68DV7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF43Q68DV7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF43Q68DV7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF43Q68DV7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF43Q68DV7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RNF43Q68DV7 C11orf96-202ENST00000528572 1834 ntBASIC22.25■■□□□ 1.15
RNF43Q68DV7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF43Q68DV7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.25■■□□□ 1.15
RNF43Q68DV7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF43Q68DV7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF43Q68DV7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF43Q68DV7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF43Q68DV7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF43Q68DV7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF43Q68DV7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF43Q68DV7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF43Q68DV7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 AC087742.1-201ENST00000575880 1738 ntBASIC22.24■■□□□ 1.15
RNF43Q68DV7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF43Q68DV7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF43Q68DV7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF43Q68DV7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF43Q68DV7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF43Q68DV7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF43Q68DV7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF43Q68DV7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF43Q68DV7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 AC139530.1-201ENST00000575312 1977 ntBASIC22.22■■□□□ 1.15
RNF43Q68DV7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF43Q68DV7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
RNF43Q68DV7 AC092053.2-201ENST00000640557 1818 ntBASIC22.22■■□□□ 1.15
RNF43Q68DV7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF43Q68DV7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF43Q68DV7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RNF43Q68DV7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF43Q68DV7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RNF43Q68DV7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF43Q68DV7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF43Q68DV7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF43Q68DV7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF43Q68DV7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RNF43Q68DV7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF43Q68DV7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF43Q68DV7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.2■■□□□ 1.15
RNF43Q68DV7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.15
RNF43Q68DV7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF43Q68DV7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF43Q68DV7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF43Q68DV7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF43Q68DV7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms