Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRK2Q5S007 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
LRRK2Q5S007 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRK2Q5S007 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRK2Q5S007 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRK2Q5S007 AC087499.1-201ENST00000418141 1075 ntBASIC18.71■□□□□ 0.59
LRRK2Q5S007 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 AL353708.3-201ENST00000610272 989 ntBASIC18.71■□□□□ 0.59
LRRK2Q5S007 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRK2Q5S007 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRK2Q5S007 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 RN7SL471P-201ENST00000580476 299 ntBASIC18.71■□□□□ 0.59
LRRK2Q5S007 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRK2Q5S007 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRK2Q5S007 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRK2Q5S007 RBM17P2-201ENST00000616397 1405 ntBASIC18.7■□□□□ 0.58
LRRK2Q5S007 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRK2Q5S007 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.7■□□□□ 0.58
LRRK2Q5S007 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LRRK2Q5S007 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LRRK2Q5S007 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.7■□□□□ 0.58
LRRK2Q5S007 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.7■□□□□ 0.58
LRRK2Q5S007 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRRK2Q5S007 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRK2Q5S007 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 LINC00543-201ENST00000567234 1845 ntBASIC18.69■□□□□ 0.58
LRRK2Q5S007 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRK2Q5S007 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 AC060766.5-201ENST00000590539 871 ntBASIC18.69■□□□□ 0.58
LRRK2Q5S007 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 AC079630.1-202ENST00000618127 1840 ntBASIC18.69■□□□□ 0.58
LRRK2Q5S007 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRK2Q5S007 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRK2Q5S007 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRK2Q5S007 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.69■□□□□ 0.58
LRRK2Q5S007 KRT16P2-201ENST00000414673 1423 ntBASIC18.69■□□□□ 0.58
LRRK2Q5S007 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRK2Q5S007 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 TSPY7P-201ENST00000431358 1114 ntBASIC18.68■□□□□ 0.58
LRRK2Q5S007 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 AL355075.4-201ENST00000554988 638 ntBASIC18.68■□□□□ 0.58
LRRK2Q5S007 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 RPS2P55-201ENST00000397318 883 ntBASIC18.68■□□□□ 0.58
LRRK2Q5S007 AC107956.1-201ENST00000494359 873 ntBASIC18.68■□□□□ 0.58
LRRK2Q5S007 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRK2Q5S007 AL353803.4-201ENST00000565882 1934 ntBASIC18.68■□□□□ 0.58
LRRK2Q5S007 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRK2Q5S007 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 EEF1DP3-203ENST00000566025 782 ntBASIC18.67■□□□□ 0.58
LRRK2Q5S007 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRK2Q5S007 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRRK2Q5S007 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms