Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 TPM2YIL138C 486 nt5.03□□□□□ -1.6
MSH6Q03834 NMA1YLR328W 1206 nt5.03□□□□□ -1.6
MSH6Q03834 YML057C-AYML057C-A 390 nt5.03□□□□□ -1.6
MSH6Q03834 ATP18YML081C-A 180 nt5.03□□□□□ -1.6
MSH6Q03834 TIF4632YGL049C 2745 nt5.03□□□□□ -1.6
MSH6Q03834 TUB2YFL037W 1374 nt5.03□□□□□ -1.6
MSH6Q03834 YJL049WYJL049W 1353 nt5.03□□□□□ -1.6
MSH6Q03834 NEL1YHR035W 1893 nt5.03□□□□□ -1.6
MSH6Q03834 AZR1YGR224W 1842 nt5.02□□□□□ -1.61
MSH6Q03834 HRK1YOR267C 2280 nt5.02□□□□□ -1.61
MSH6Q03834 YPD1YDL235C 504 nt5.02□□□□□ -1.61
MSH6Q03834 BSC2YDR275W 708 nt5.02□□□□□ -1.61
MSH6Q03834 RPL9AYGL147C 576 nt5.02□□□□□ -1.61
MSH6Q03834 YGR190CYGR190C 366 nt5.02□□□□□ -1.61
MSH6Q03834 YNR034W-AYNR034W-A 297 nt5.02□□□□□ -1.61
MSH6Q03834 YOR248WYOR248W 303 nt5.02□□□□□ -1.61
MSH6Q03834 snR17bsnR17b 332 nt5.02□□□□□ -1.61
MSH6Q03834 UBP16YPL072W 1500 nt5.02□□□□□ -1.61
MSH6Q03834 THI20YOL055C 1656 nt5.02□□□□□ -1.61
MSH6Q03834 VPS33YLR396C 2076 nt5.01□□□□□ -1.61
MSH6Q03834 HOT1YMR172W 2160 nt5.01□□□□□ -1.61
MSH6Q03834 BNA7YDR428C 786 nt5.01□□□□□ -1.61
MSH6Q03834 YER119C-AYER119C-A 372 nt5.01□□□□□ -1.61
MSH6Q03834 TWF1YGR080W 999 nt5.01□□□□□ -1.61
MSH6Q03834 YET1YKL065C 621 nt5.01□□□□□ -1.61
MSH6Q03834 YLR290CYLR290C 834 nt5.01□□□□□ -1.61
MSH6Q03834 HTA2YBL003C 399 nt5.01□□□□□ -1.61
MSH6Q03834 snR17asnR17a 333 nt5.01□□□□□ -1.61
MSH6Q03834 AVT5YBL089W 1380 nt5.01□□□□□ -1.61
MSH6Q03834 MSM1YGR171C 1728 nt5□□□□□ -1.61
MSH6Q03834 TRE1YPL176C 2352 nt5□□□□□ -1.61
MSH6Q03834 YMR196WYMR196W 3267 nt5□□□□□ -1.61
MSH6Q03834 LPP1YDR503C 825 nt5□□□□□ -1.61
MSH6Q03834 RPL34AYER056C-A 366 nt5□□□□□ -1.61
MSH6Q03834 RMR1YGL250W 726 nt5□□□□□ -1.61
MSH6Q03834 YGR228WYGR228W 345 nt5□□□□□ -1.61
MSH6Q03834 YHL048C-AYHL048C-A 135 nt5□□□□□ -1.61
MSH6Q03834 YLR125WYLR125W 411 nt5□□□□□ -1.61
MSH6Q03834 ARC18YLR370C 537 nt5□□□□□ -1.61
MSH6Q03834 YMR153C-AYMR153C-A 336 nt5□□□□□ -1.61
MSH6Q03834 YOR034C-AYOR034C-A 243 nt5□□□□□ -1.61
MSH6Q03834 YOR379CYOR379C 339 nt5□□□□□ -1.61
MSH6Q03834 SUS1YBR111W-A 291 nt5□□□□□ -1.61
MSH6Q03834 PDR15YDR406W 4590 nt5□□□□□ -1.61
MSH6Q03834 DBP3YGL078C 1572 nt4.99□□□□□ -1.61
MSH6Q03834 CTT1YGR088W 1689 nt4.99□□□□□ -1.61
MSH6Q03834 UBP10YNL186W 2379 nt4.99□□□□□ -1.61
MSH6Q03834 SEC27YGL137W 2670 nt4.99□□□□□ -1.61
MSH6Q03834 ATG31YDR022C 591 nt4.99□□□□□ -1.61
MSH6Q03834 CNL1YDR357C 369 nt4.99□□□□□ -1.61
MSH6Q03834 YJL119CYJL119C 324 nt4.99□□□□□ -1.61
MSH6Q03834 ACF4YJR083C 930 nt4.99□□□□□ -1.61
MSH6Q03834 YAL044W-AYAL044W-A 333 nt4.99□□□□□ -1.61
MSH6Q03834 YAR075WYAR075W 474 nt4.99□□□□□ -1.61
MSH6Q03834 PBI2YNL015W 228 nt4.99□□□□□ -1.61
MSH6Q03834 GPI15YNL038W 690 nt4.99□□□□□ -1.61
MSH6Q03834 NGL1YOL042W 1092 nt4.99□□□□□ -1.61
MSH6Q03834 GPX2YBR244W 489 nt4.99□□□□□ -1.61
MSH6Q03834 PGM2YMR105C 1710 nt4.99□□□□□ -1.61
MSH6Q03834 YMR102CYMR102C 2505 nt4.99□□□□□ -1.61
MSH6Q03834 YER087C-AYER087C-A 552 nt4.98□□□□□ -1.61
MSH6Q03834 SEC4YFL005W 648 nt4.98□□□□□ -1.61
MSH6Q03834 tR(ACG)JtR(ACG)J 73 nt4.98□□□□□ -1.61
MSH6Q03834 YIL024CYIL024C 570 nt4.98□□□□□ -1.61
MSH6Q03834 DCS2YOR173W 1062 nt4.98□□□□□ -1.61
MSH6Q03834 YPL185WYPL185W 396 nt4.98□□□□□ -1.61
MSH6Q03834 PIN3YPR154W 648 nt4.98□□□□□ -1.61
MSH6Q03834 YCL021W-AYCL021W-A 378 nt4.98□□□□□ -1.61
MSH6Q03834 SLY41YOR307C 1362 nt4.98□□□□□ -1.61
MSH6Q03834 SDS23YGL056C 1584 nt4.98□□□□□ -1.61
MSH6Q03834 KRE6YPR159W 2163 nt4.98□□□□□ -1.61
MSH6Q03834 HIR2YOR038C 2628 nt4.97□□□□□ -1.61
MSH6Q03834 CDC15YAR019C 2925 nt4.97□□□□□ -1.61
MSH6Q03834 PRS5YOL061W 1491 nt4.97□□□□□ -1.61
MSH6Q03834 VAB2YEL005C 849 nt4.97□□□□□ -1.61
MSH6Q03834 YER079WYER079W 633 nt4.97□□□□□ -1.61
MSH6Q03834 ARO2YGL148W 1131 nt4.97□□□□□ -1.61
MSH6Q03834 YHL049CYHL049C 816 nt4.97□□□□□ -1.61
MSH6Q03834 YKL065W-AYKL065W-A 222 nt4.97□□□□□ -1.61
MSH6Q03834 YLL044WYLL044W 447 nt4.97□□□□□ -1.61
MSH6Q03834 SDO1YLR022C 753 nt4.97□□□□□ -1.61
MSH6Q03834 MIM2YLR099W-A 264 nt4.97□□□□□ -1.61
MSH6Q03834 YLR297WYLR297W 390 nt4.97□□□□□ -1.61
MSH6Q03834 CAT5YOR125C 702 nt4.97□□□□□ -1.61
MSH6Q03834 PDR10YOR328W 4695 nt4.97□□□□□ -1.61
MSH6Q03834 SSB1YDL229W 1842 nt4.97□□□□□ -1.61
MSH6Q03834 SSB2YNL209W 1842 nt4.97□□□□□ -1.61
MSH6Q03834 CTR86YCR054C 1692 nt4.96□□□□□ -1.61
MSH6Q03834 ANR2YKL047W 1551 nt4.96□□□□□ -1.62
MSH6Q03834 MON1YGL124C 1935 nt4.96□□□□□ -1.62
MSH6Q03834 AIM7YDR063W 450 nt4.96□□□□□ -1.62
MSH6Q03834 HLR1YDR528W 1272 nt4.96□□□□□ -1.62
MSH6Q03834 LSB1YGR136W 726 nt4.96□□□□□ -1.62
MSH6Q03834 RTT102YGR275W 474 nt4.96□□□□□ -1.62
MSH6Q03834 SDP1YIL113W 630 nt4.96□□□□□ -1.62
MSH6Q03834 YJR038CYJR038C 363 nt4.96□□□□□ -1.62
MSH6Q03834 YKL070WYKL070W 510 nt4.96□□□□□ -1.62
MSH6Q03834 YLR287CYLR287C 1068 nt4.96□□□□□ -1.62
MSH6Q03834 NHP6AYPR052C 282 nt4.96□□□□□ -1.62
MSH6Q03834 MNN1YER001W 2289 nt4.96□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 27.6 ms