Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.21■□□□□ 0.67
RPS4XP62701 FEM1AP4-201ENST00000443167 1987 ntBASIC19.21■□□□□ 0.67
RPS4XP62701 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.21■□□□□ 0.67
RPS4XP62701 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.21■□□□□ 0.67
RPS4XP62701 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS4XP62701 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.21■□□□□ 0.67
RPS4XP62701 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.21■□□□□ 0.67
RPS4XP62701 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 AC003102.1-202ENST00000563394 1796 ntBASIC19.21■□□□□ 0.67
RPS4XP62701 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4XP62701 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RPS4XP62701 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RPS4XP62701 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4XP62701 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RPS4XP62701 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.2■□□□□ 0.66
RPS4XP62701 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.2■□□□□ 0.66
RPS4XP62701 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4XP62701 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPS4XP62701 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4XP62701 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.2■□□□□ 0.66
RPS4XP62701 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
RPS4XP62701 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4XP62701 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4XP62701 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4XP62701 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.19■□□□□ 0.66
RPS4XP62701 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4XP62701 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.19■□□□□ 0.66
RPS4XP62701 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4XP62701 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.19■□□□□ 0.66
RPS4XP62701 SMUG1P1-201ENST00000590640 811 ntBASIC19.19■□□□□ 0.66
RPS4XP62701 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4XP62701 AP006587.3-201ENST00000525742 1516 ntBASIC19.19■□□□□ 0.66
RPS4XP62701 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4XP62701 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.19■□□□□ 0.66
RPS4XP62701 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RPS4XP62701 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.18■□□□□ 0.66
RPS4XP62701 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RPS4XP62701 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4XP62701 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS4XP62701 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS4XP62701 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS4XP62701 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.17■□□□□ 0.66
RPS4XP62701 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS4XP62701 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RPS4XP62701 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS4XP62701 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RPS4XP62701 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4XP62701 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPS4XP62701 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RPS4XP62701 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.16■□□□□ 0.66
RPS4XP62701 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
RPS4XP62701 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS4XP62701 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 IGHV3-19-201ENST00000521488 291 ntBASIC19.16■□□□□ 0.66
RPS4XP62701 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS4XP62701 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS4XP62701 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS4XP62701 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4XP62701 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4XP62701 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4XP62701 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms