Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.03■□□□□ 0.8
NR1H2P55055 AL353803.4-201ENST00000565882 1934 ntBASIC20.03■□□□□ 0.8
NR1H2P55055 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H2P55055 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H2P55055 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H2P55055 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H2P55055 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.02■□□□□ 0.8
NR1H2P55055 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H2P55055 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.02■□□□□ 0.8
NR1H2P55055 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NR1H2P55055 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.02■□□□□ 0.8
NR1H2P55055 AC133561.4-201ENST00000566112 224 ntBASIC20.02■□□□□ 0.8
NR1H2P55055 AC110285.6-201ENST00000617652 491 ntBASIC20.02■□□□□ 0.8
NR1H2P55055 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NR1H2P55055 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.02■□□□□ 0.8
NR1H2P55055 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.02■□□□□ 0.79
NR1H2P55055 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.02■□□□□ 0.79
NR1H2P55055 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NR1H2P55055 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
NR1H2P55055 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NR1H2P55055 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.01■□□□□ 0.79
NR1H2P55055 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.01■□□□□ 0.79
NR1H2P55055 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.01■□□□□ 0.79
NR1H2P55055 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NR1H2P55055 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.01■□□□□ 0.79
NR1H2P55055 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.01■□□□□ 0.79
NR1H2P55055 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NR1H2P55055 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
NR1H2P55055 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR1H2P55055 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20■□□□□ 0.79
NR1H2P55055 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NR1H2P55055 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NR1H2P55055 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20■□□□□ 0.79
NR1H2P55055 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20■□□□□ 0.79
NR1H2P55055 FEM1AP1-201ENST00000431297 1995 ntBASIC20■□□□□ 0.79
NR1H2P55055 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NR1H2P55055 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20■□□□□ 0.79
NR1H2P55055 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NR1H2P55055 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20■□□□□ 0.79
NR1H2P55055 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NR1H2P55055 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H2P55055 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NR1H2P55055 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
NR1H2P55055 AC005703.6-201ENST00000623265 1329 ntBASIC19.99■□□□□ 0.79
NR1H2P55055 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NR1H2P55055 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H2P55055 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
NR1H2P55055 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
NR1H2P55055 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
NR1H2P55055 SRD5A1P1-201ENST00000442297 786 ntBASIC19.98■□□□□ 0.79
NR1H2P55055 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.98■□□□□ 0.79
NR1H2P55055 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.98■□□□□ 0.79
NR1H2P55055 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
NR1H2P55055 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NR1H2P55055 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NR1H2P55055 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.97■□□□□ 0.79
NR1H2P55055 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NR1H2P55055 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NR1H2P55055 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NR1H2P55055 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
NR1H2P55055 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NR1H2P55055 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms