Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PMS2P54278 LINC01006-201ENST00000333319 2292 ntBASIC21.91■■□□□ 1.1
PMS2P54278 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.91■■□□□ 1.1
PMS2P54278 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 AC079089.2-201ENST00000531211 1277 ntBASIC21.91■■□□□ 1.1
PMS2P54278 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.91■■□□□ 1.1
PMS2P54278 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
PMS2P54278 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.91■■□□□ 1.1
PMS2P54278 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PMS2P54278 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
PMS2P54278 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.9■■□□□ 1.1
PMS2P54278 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.9■■□□□ 1.1
PMS2P54278 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.9■■□□□ 1.1
PMS2P54278 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.9■■□□□ 1.1
PMS2P54278 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.9■■□□□ 1.1
PMS2P54278 AL499627.2-201ENST00000606283 725 ntBASIC21.9■■□□□ 1.1
PMS2P54278 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PMS2P54278 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS2P54278 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.89■■□□□ 1.09
PMS2P54278 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.89■■□□□ 1.09
PMS2P54278 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS2P54278 MIR4466-201ENST00000606121 54 ntBASIC21.89■■□□□ 1.09
PMS2P54278 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PMS2P54278 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PMS2P54278 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.88■■□□□ 1.09
PMS2P54278 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PMS2P54278 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS2P54278 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS2P54278 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PMS2P54278 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PMS2P54278 AC096631.2-201ENST00000436136 790 ntBASIC21.88■■□□□ 1.09
PMS2P54278 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.88■■□□□ 1.09
PMS2P54278 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PMS2P54278 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.88■■□□□ 1.09
PMS2P54278 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.88■■□□□ 1.09
PMS2P54278 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PMS2P54278 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PMS2P54278 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.87■■□□□ 1.09
PMS2P54278 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PMS2P54278 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
PMS2P54278 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PMS2P54278 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.87■■□□□ 1.09
PMS2P54278 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PMS2P54278 OXCT2P1-201ENST00000447263 1535 ntBASIC21.86■■□□□ 1.09
PMS2P54278 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.86■■□□□ 1.09
PMS2P54278 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PMS2P54278 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 AL031602.1-201ENST00000633169 911 ntBASIC21.86■■□□□ 1.09
PMS2P54278 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.86■■□□□ 1.09
PMS2P54278 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PMS2P54278 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS2P54278 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.85■■□□□ 1.09
PMS2P54278 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PMS2P54278 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PMS2P54278 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.85■■□□□ 1.09
PMS2P54278 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.85■■□□□ 1.09
PMS2P54278 AL512631.2-201ENST00000604634 923 ntBASIC21.85■■□□□ 1.09
PMS2P54278 AC005837.3-201ENST00000612163 286 ntBASIC21.85■■□□□ 1.09
PMS2P54278 OR7E47P-201ENST00000546390 1422 ntBASIC21.85■■□□□ 1.09
PMS2P54278 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.85■■□□□ 1.09
PMS2P54278 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.85■■□□□ 1.09
PMS2P54278 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PMS2P54278 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PMS2P54278 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PMS2P54278 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PMS2P54278 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.85■■□□□ 1.09
PMS2P54278 FEM1AP1-201ENST00000431297 1995 ntBASIC21.85■■□□□ 1.09
PMS2P54278 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.85■■□□□ 1.09
PMS2P54278 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms