Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RBM17P2-201ENST00000616397 1405 ntBASIC30.78■■■□□ 2.52
CLTCL1P53675 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CLTCL1P53675 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CLTCL1P53675 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.77■■■□□ 2.52
CLTCL1P53675 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CLTCL1P53675 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CLTCL1P53675 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CLTCL1P53675 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.77■■■□□ 2.52
CLTCL1P53675 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC30.76■■■□□ 2.52
CLTCL1P53675 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.76■■■□□ 2.52
CLTCL1P53675 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC30.76■■■□□ 2.52
CLTCL1P53675 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.76■■■□□ 2.52
CLTCL1P53675 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
CLTCL1P53675 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC30.76■■■□□ 2.52
CLTCL1P53675 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC30.76■■■□□ 2.52
CLTCL1P53675 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC30.76■■■□□ 2.51
CLTCL1P53675 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CLTCL1P53675 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC30.76■■■□□ 2.51
CLTCL1P53675 KRT16P2-201ENST00000414673 1423 ntBASIC30.76■■■□□ 2.51
CLTCL1P53675 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLTCL1P53675 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CLTCL1P53675 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CLTCL1P53675 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLTCL1P53675 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC30.75■■■□□ 2.51
CLTCL1P53675 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLTCL1P53675 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
CLTCL1P53675 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
CLTCL1P53675 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CLTCL1P53675 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CLTCL1P53675 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.74■■■□□ 2.51
CLTCL1P53675 OR10C1-204ENST00000622521 1039 ntBASIC30.74■■■□□ 2.51
CLTCL1P53675 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CLTCL1P53675 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CLTCL1P53675 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CLTCL1P53675 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CLTCL1P53675 MIPEPP3-201ENST00000412105 444 ntBASIC30.73■■■□□ 2.51
CLTCL1P53675 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.73■■■□□ 2.51
CLTCL1P53675 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLTCL1P53675 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
CLTCL1P53675 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.73■■■□□ 2.51
CLTCL1P53675 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLTCL1P53675 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CLTCL1P53675 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
CLTCL1P53675 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CLTCL1P53675 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLTCL1P53675 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC30.73■■■□□ 2.51
CLTCL1P53675 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC30.73■■■□□ 2.51
CLTCL1P53675 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
CLTCL1P53675 AC133041.1-202ENST00000642053 222 ntBASIC30.73■■■□□ 2.51
CLTCL1P53675 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CLTCL1P53675 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CLTCL1P53675 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLTCL1P53675 AC061975.6-201ENST00000579045 1553 ntBASIC30.72■■■□□ 2.51
CLTCL1P53675 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLTCL1P53675 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLTCL1P53675 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.72■■■□□ 2.51
CLTCL1P53675 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.72■■■□□ 2.51
CLTCL1P53675 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.72■■■□□ 2.51
CLTCL1P53675 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLTCL1P53675 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
CLTCL1P53675 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC30.71■■■□□ 2.51
CLTCL1P53675 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CLTCL1P53675 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.71■■■□□ 2.51
CLTCL1P53675 AC092118.2-201ENST00000613495 667 ntBASIC30.71■■■□□ 2.51
CLTCL1P53675 TMEM191A-211ENST00000637163 1067 ntBASIC30.71■■■□□ 2.51
CLTCL1P53675 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CLTCL1P53675 LTK-203ENST00000453182 2412 ntTSL 2 BASIC30.7■■■□□ 2.51
CLTCL1P53675 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
CLTCL1P53675 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLTCL1P53675 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.7■■■□□ 2.51
CLTCL1P53675 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CLTCL1P53675 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLTCL1P53675 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLTCL1P53675 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC30.7■■■□□ 2.5
CLTCL1P53675 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLTCL1P53675 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 AC008175.2-201ENST00000612840 297 ntBASIC30.69■■■□□ 2.5
CLTCL1P53675 TBCB-214ENST00000629269 413 ntTSL 5 BASIC30.69■■■□□ 2.5
CLTCL1P53675 MYC-209ENST00000641252 345 ntBASIC30.69■■■□□ 2.5
CLTCL1P53675 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30.69■■■□□ 2.5
CLTCL1P53675 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC30.69■■■□□ 2.5
CLTCL1P53675 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
CLTCL1P53675 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CLTCL1P53675 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CLTCL1P53675 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CLTCL1P53675 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC30.68■■■□□ 2.5
CLTCL1P53675 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CLTCL1P53675 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC30.68■■■□□ 2.5
CLTCL1P53675 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CLTCL1P53675 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.68■■■□□ 2.5
CLTCL1P53675 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.68■■■□□ 2.5
CLTCL1P53675 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CLTCL1P53675 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC30.67■■■□□ 2.5
CLTCL1P53675 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CLTCL1P53675 POU5F1P4-201ENST00000413175 1085 ntBASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms