Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SLC9A3P48764 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC9A3P48764 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC9A3P48764 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC9A3P48764 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC9A3P48764 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC9A3P48764 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC9A3P48764 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC9A3P48764 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 SERBP1P1-201ENST00000396021 1160 ntBASIC19.42■□□□□ 0.7
SLC9A3P48764 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC9A3P48764 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC9A3P48764 AC011298.3-201ENST00000615796 283 ntBASIC19.42■□□□□ 0.7
SLC9A3P48764 AC136469.2-201ENST00000623944 1028 ntBASIC19.42■□□□□ 0.7
SLC9A3P48764 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC9A3P48764 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC9A3P48764 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
SLC9A3P48764 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC9A3P48764 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC9A3P48764 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC9A3P48764 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SLC9A3P48764 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC9A3P48764 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC9A3P48764 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC9A3P48764 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC9A3P48764 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC9A3P48764 AL034346.1-201ENST00000568244 1277 ntBASIC19.41■□□□□ 0.7
SLC9A3P48764 AC104564.3-201ENST00000582367 638 ntBASIC19.41■□□□□ 0.7
SLC9A3P48764 AC010525.1-201ENST00000585559 441 ntBASIC19.41■□□□□ 0.7
SLC9A3P48764 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC9A3P48764 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC9A3P48764 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC9A3P48764 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC9A3P48764 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SLC9A3P48764 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 MIR4466-201ENST00000606121 54 ntBASIC19.4■□□□□ 0.7
SLC9A3P48764 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC9A3P48764 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC9A3P48764 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC9A3P48764 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC9A3P48764 AC026471.6-201ENST00000622954 1905 ntBASIC19.39■□□□□ 0.7
SLC9A3P48764 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A3P48764 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A3P48764 AP005435.1-201ENST00000529293 1178 ntBASIC19.39■□□□□ 0.69
SLC9A3P48764 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC9A3P48764 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A3P48764 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A3P48764 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLC9A3P48764 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC9A3P48764 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SLC9A3P48764 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC9A3P48764 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A3P48764 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A3P48764 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC9A3P48764 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC9A3P48764 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC9A3P48764 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC9A3P48764 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC9A3P48764 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC9A3P48764 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC9A3P48764 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC9A3P48764 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC9A3P48764 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC9A3P48764 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC9A3P48764 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
SLC9A3P48764 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A3P48764 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A3P48764 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC9A3P48764 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC9A3P48764 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC9A3P48764 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC9A3P48764 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SLC9A3P48764 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
SLC9A3P48764 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms