Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A6P48664 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A6P48664 FEM1AP1-201ENST00000431297 1995 ntBASIC20.9■□□□□ 0.94
SLC1A6P48664 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC1A6P48664 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A6P48664 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SLC1A6P48664 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC1A6P48664 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC1A6P48664 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC1A6P48664 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A6P48664 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SLC1A6P48664 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A6P48664 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A6P48664 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SLC1A6P48664 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A6P48664 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A6P48664 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC1A6P48664 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC1A6P48664 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC1A6P48664 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC1A6P48664 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SLC1A6P48664 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC1A6P48664 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC1A6P48664 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC1A6P48664 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 MIR6724-1-201ENST00000616420 92 ntBASIC20.87■□□□□ 0.93
SLC1A6P48664 MIR6724-2-201ENST00000616483 92 ntBASIC20.87■□□□□ 0.93
SLC1A6P48664 MIR6724-4-201ENST00000617390 92 ntBASIC20.87■□□□□ 0.93
SLC1A6P48664 MIR6724-3-201ENST00000622482 92 ntBASIC20.87■□□□□ 0.93
SLC1A6P48664 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC1A6P48664 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 AC092667.1-201ENST00000434301 2586 ntBASIC20.87■□□□□ 0.93
SLC1A6P48664 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC1A6P48664 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC1A6P48664 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SLC1A6P48664 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SLC1A6P48664 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC1A6P48664 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC1A6P48664 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC1A6P48664 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC1A6P48664 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC1A6P48664 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 AC087239.1-201ENST00000622671 572 ntBASIC20.85■□□□□ 0.93
SLC1A6P48664 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC1A6P48664 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC1A6P48664 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC1A6P48664 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC1A6P48664 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC1A6P48664 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC1A6P48664 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC1A6P48664 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SLC1A6P48664 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC1A6P48664 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A6P48664 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms