Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX5P48382 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX5P48382 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.34■■□□□ 1.81
RFX5P48382 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX5P48382 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX5P48382 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX5P48382 CDCA4P2-201ENST00000441182 718 ntBASIC26.34■■□□□ 1.81
RFX5P48382 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX5P48382 AC080038.1-201ENST00000611274 1154 ntBASIC26.34■■□□□ 1.81
RFX5P48382 AC011767.1-201ENST00000617410 1153 ntBASIC26.34■■□□□ 1.81
RFX5P48382 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.34■■□□□ 1.81
RFX5P48382 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
RFX5P48382 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 MFSD11-216ENST00000590393 1141 ntBASIC26.33■■□□□ 1.81
RFX5P48382 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX5P48382 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.33■■□□□ 1.8
RFX5P48382 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFX5P48382 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX5P48382 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RFX5P48382 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.32■■□□□ 1.8
RFX5P48382 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.32■■□□□ 1.8
RFX5P48382 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.32■■□□□ 1.8
RFX5P48382 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.32■■□□□ 1.8
RFX5P48382 AC073111.5-205ENST00000641717 521 ntBASIC26.32■■□□□ 1.8
RFX5P48382 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RFX5P48382 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RFX5P48382 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.31■■□□□ 1.8
RFX5P48382 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFX5P48382 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
RFX5P48382 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RFX5P48382 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.3■■□□□ 1.8
RFX5P48382 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 BID-214ENST00000617586 542 ntTSL 5 BASIC26.3■■□□□ 1.8
RFX5P48382 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.3■■□□□ 1.8
RFX5P48382 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFX5P48382 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX5P48382 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX5P48382 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX5P48382 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.29■■□□□ 1.8
RFX5P48382 KRT18P11-201ENST00000435214 1283 ntBASIC26.29■■□□□ 1.8
RFX5P48382 SLC7A5P2-201ENST00000553010 536 ntBASIC26.29■■□□□ 1.8
RFX5P48382 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.29■■□□□ 1.8
RFX5P48382 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RFX5P48382 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RFX5P48382 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
RFX5P48382 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.28■■□□□ 1.8
RFX5P48382 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.28■■□□□ 1.8
RFX5P48382 MYCNOS-205ENST00000641950 531 ntBASIC26.28■■□□□ 1.8
RFX5P48382 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.28■■□□□ 1.8
RFX5P48382 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFX5P48382 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
RFX5P48382 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.27■■□□□ 1.8
RFX5P48382 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.27■■□□□ 1.8
RFX5P48382 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.27■■□□□ 1.8
RFX5P48382 KRT18P20-201ENST00000548986 1279 ntBASIC26.27■■□□□ 1.8
RFX5P48382 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFX5P48382 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.26■■□□□ 1.79
RFX5P48382 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX5P48382 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RFX5P48382 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.26■■□□□ 1.79
RFX5P48382 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.26■■□□□ 1.79
RFX5P48382 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.26■■□□□ 1.79
RFX5P48382 DUX4L16-201ENST00000555130 1264 ntBASIC26.26■■□□□ 1.79
RFX5P48382 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX5P48382 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RFX5P48382 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.25■■□□□ 1.79
RFX5P48382 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RFX5P48382 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.25■■□□□ 1.79
RFX5P48382 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms