Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
NCAPD3P42695 SNORA78-201ENST00000459373 127 ntBASIC38.27■■■■□ 3.72
NCAPD3P42695 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC38.27■■■■□ 3.72
NCAPD3P42695 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
NCAPD3P42695 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC38.26■■■■□ 3.72
NCAPD3P42695 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC38.26■■■■□ 3.72
NCAPD3P42695 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC38.26■■■■□ 3.72
NCAPD3P42695 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC38.26■■■■□ 3.72
NCAPD3P42695 AL034346.1-201ENST00000568244 1277 ntBASIC38.26■■■■□ 3.72
NCAPD3P42695 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC38.26■■■■□ 3.72
NCAPD3P42695 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.71
NCAPD3P42695 AC142381.3-201ENST00000568208 1670 ntBASIC38.26■■■■□ 3.71
NCAPD3P42695 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC38.25■■■■□ 3.71
NCAPD3P42695 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
NCAPD3P42695 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
NCAPD3P42695 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC38.25■■■■□ 3.71
NCAPD3P42695 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
NCAPD3P42695 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC38.25■■■■□ 3.71
NCAPD3P42695 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
NCAPD3P42695 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC38.25■■■■□ 3.71
NCAPD3P42695 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC38.25■■■■□ 3.71
NCAPD3P42695 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC38.25■■■■□ 3.71
NCAPD3P42695 HLA-B-256ENST00000639848 1089 ntBASIC38.25■■■■□ 3.71
NCAPD3P42695 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC38.24■■■■□ 3.71
NCAPD3P42695 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
NCAPD3P42695 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
NCAPD3P42695 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC38.24■■■■□ 3.71
NCAPD3P42695 CYP2T3P-201ENST00000601990 817 ntBASIC38.24■■■■□ 3.71
NCAPD3P42695 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC38.24■■■■□ 3.71
NCAPD3P42695 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC38.24■■■■□ 3.71
NCAPD3P42695 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC38.24■■■■□ 3.71
NCAPD3P42695 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
NCAPD3P42695 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC38.23■■■■□ 3.71
NCAPD3P42695 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC38.23■■■■□ 3.71
NCAPD3P42695 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC38.23■■■■□ 3.71
NCAPD3P42695 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
NCAPD3P42695 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC38.23■■■■□ 3.71
NCAPD3P42695 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC38.23■■■■□ 3.71
NCAPD3P42695 KRT16P2-201ENST00000414673 1423 ntBASIC38.23■■■■□ 3.71
NCAPD3P42695 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC38.23■■■■□ 3.71
NCAPD3P42695 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
NCAPD3P42695 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
NCAPD3P42695 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC38.22■■■■□ 3.71
NCAPD3P42695 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
NCAPD3P42695 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC38.22■■■■□ 3.71
NCAPD3P42695 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC38.22■■■■□ 3.71
NCAPD3P42695 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC38.22■■■■□ 3.71
NCAPD3P42695 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC38.22■■■■□ 3.71
NCAPD3P42695 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
NCAPD3P42695 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
NCAPD3P42695 MED17-227ENST00000640521 2047 ntTSL 5 BASIC38.21■■■■□ 3.71
NCAPD3P42695 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC38.21■■■■□ 3.71
NCAPD3P42695 CD44-222ENST00000526025 1052 ntTSL 2 BASIC38.21■■■■□ 3.71
NCAPD3P42695 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
NCAPD3P42695 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC38.2■■■■□ 3.71
NCAPD3P42695 KRT17P1-201ENST00000399211 1546 ntBASIC38.2■■■■□ 3.71
NCAPD3P42695 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC38.2■■■■□ 3.71
NCAPD3P42695 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC38.2■■■■□ 3.71
NCAPD3P42695 REXO1L12P-201ENST00000622156 912 ntBASIC38.2■■■■□ 3.71
NCAPD3P42695 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC38.2■■■■□ 3.7
NCAPD3P42695 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
NCAPD3P42695 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC38.19■■■■□ 3.7
NCAPD3P42695 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC38.19■■■■□ 3.7
NCAPD3P42695 NME6-213ENST00000451657 871 ntTSL 2 BASIC38.19■■■■□ 3.7
NCAPD3P42695 PBX1-209ENST00000485769 834 ntTSL 2 BASIC38.19■■■■□ 3.7
NCAPD3P42695 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC38.19■■■■□ 3.7
NCAPD3P42695 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC38.18■■■■□ 3.7
NCAPD3P42695 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
NCAPD3P42695 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC38.18■■■■□ 3.7
NCAPD3P42695 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC38.18■■■■□ 3.7
NCAPD3P42695 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC38.18■■■■□ 3.7
NCAPD3P42695 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC38.18■■■■□ 3.7
NCAPD3P42695 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC38.18■■■■□ 3.7
NCAPD3P42695 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC38.18■■■■□ 3.7
NCAPD3P42695 POU5F1P4-201ENST00000413175 1085 ntBASIC38.17■■■■□ 3.7
NCAPD3P42695 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
NCAPD3P42695 C1QBPP2-201ENST00000528754 825 ntBASIC38.17■■■■□ 3.7
NCAPD3P42695 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC38.17■■■■□ 3.7
NCAPD3P42695 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC38.17■■■■□ 3.7
NCAPD3P42695 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
NCAPD3P42695 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
NCAPD3P42695 MDFI-202ENST00000373050 809 ntTSL 2 BASIC38.16■■■■□ 3.7
NCAPD3P42695 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC38.16■■■■□ 3.7
NCAPD3P42695 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC38.16■■■■□ 3.7
NCAPD3P42695 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
NCAPD3P42695 BX088651.1-201ENST00000540551 451 ntBASIC38.15■■■■□ 3.7
NCAPD3P42695 AC233263.1-201ENST00000578059 224 ntBASIC38.15■■■■□ 3.7
NCAPD3P42695 AC120498.10-201ENST00000621827 505 ntBASIC38.15■■■■□ 3.7
NCAPD3P42695 FAM197Y4-202ENST00000622692 608 ntBASIC38.15■■■■□ 3.7
NCAPD3P42695 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
NCAPD3P42695 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC38.15■■■■□ 3.7
NCAPD3P42695 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
NCAPD3P42695 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC38.15■■■■□ 3.7
NCAPD3P42695 RNF146-206ENST00000480444 843 ntTSL 2 BASIC38.15■■■■□ 3.7
NCAPD3P42695 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC38.15■■■■□ 3.7
NCAPD3P42695 RN7SL471P-201ENST00000580476 299 ntBASIC38.15■■■■□ 3.7
NCAPD3P42695 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
NCAPD3P42695 AC008175.2-201ENST00000612840 297 ntBASIC38.15■■■■□ 3.7
NCAPD3P42695 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC38.14■■■■□ 3.7
NCAPD3P42695 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms