Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
GDNFP39905 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GDNFP39905 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.44■□□□□ 0.54
GDNFP39905 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.44■□□□□ 0.54
GDNFP39905 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
GDNFP39905 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
GDNFP39905 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
GDNFP39905 AL356441.2-201ENST00000443009 864 ntBASIC18.44■□□□□ 0.54
GDNFP39905 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.44■□□□□ 0.54
GDNFP39905 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 FEM1AP1-201ENST00000431297 1995 ntBASIC18.44■□□□□ 0.54
GDNFP39905 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDNFP39905 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
GDNFP39905 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDNFP39905 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.43■□□□□ 0.54
GDNFP39905 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDNFP39905 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDNFP39905 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDNFP39905 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
GDNFP39905 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.43■□□□□ 0.54
GDNFP39905 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.43■□□□□ 0.54
GDNFP39905 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDNFP39905 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.43■□□□□ 0.54
GDNFP39905 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.43■□□□□ 0.54
GDNFP39905 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
GDNFP39905 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.42■□□□□ 0.54
GDNFP39905 AL117332.1-201ENST00000622628 974 ntBASIC18.42■□□□□ 0.54
GDNFP39905 AC009086.3-201ENST00000623486 1008 ntBASIC18.42■□□□□ 0.54
GDNFP39905 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
GDNFP39905 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDNFP39905 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.41■□□□□ 0.54
GDNFP39905 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
GDNFP39905 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.41■□□□□ 0.54
GDNFP39905 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.41■□□□□ 0.54
GDNFP39905 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDNFP39905 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.4■□□□□ 0.54
GDNFP39905 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.4■□□□□ 0.54
GDNFP39905 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.4■□□□□ 0.54
GDNFP39905 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GDNFP39905 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.4■□□□□ 0.54
GDNFP39905 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 FP325331.1-202ENST00000623531 1380 ntBASIC18.4■□□□□ 0.54
GDNFP39905 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDNFP39905 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
GDNFP39905 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
GDNFP39905 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GDNFP39905 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
GDNFP39905 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDNFP39905 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.39■□□□□ 0.53
GDNFP39905 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.39■□□□□ 0.53
GDNFP39905 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GDNFP39905 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.39■□□□□ 0.53
GDNFP39905 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDNFP39905 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDNFP39905 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GDNFP39905 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
GDNFP39905 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.38■□□□□ 0.53
GDNFP39905 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
GDNFP39905 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms