Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 YOR396C-AYOR396C-A 483 nt5.33□□□□□ -1.56
SSF1P38789 YPL035CYPL035C 348 nt5.33□□□□□ -1.56
SSF1P38789 YPL283W-BYPL283W-B 483 nt5.33□□□□□ -1.56
SSF1P38789 DIB1YPR082C 432 nt5.33□□□□□ -1.56
SSF1P38789 YPR204C-AYPR204C-A 483 nt5.33□□□□□ -1.56
SSF1P38789 JJJ1YNL227C 1773 nt5.33□□□□□ -1.56
SSF1P38789 MNN4YKL201C 3537 nt5.33□□□□□ -1.56
SSF1P38789 ISW2YOR304W 3363 nt5.33□□□□□ -1.56
SSF1P38789 PAN1YIR006C 4443 nt5.32□□□□□ -1.56
SSF1P38789 ULP1YPL020C 1866 nt5.32□□□□□ -1.56
SSF1P38789 YGR266WYGR266W 2106 nt5.32□□□□□ -1.56
SSF1P38789 FAA1YOR317W 2103 nt5.32□□□□□ -1.56
SSF1P38789 YDR271CYDR271C 372 nt5.32□□□□□ -1.56
SSF1P38789 RPF1YHR088W 888 nt5.32□□□□□ -1.56
SSF1P38789 DSE2YHR143W 978 nt5.32□□□□□ -1.56
SSF1P38789 RSM25YIL093C 795 nt5.32□□□□□ -1.56
SSF1P38789 HLJ1YMR161W 675 nt5.32□□□□□ -1.56
SSF1P38789 DUN1YDL101C 1542 nt5.32□□□□□ -1.56
SSF1P38789 KRE6YPR159W 2163 nt5.32□□□□□ -1.56
SSF1P38789 AXL2YIL140W 2472 nt5.32□□□□□ -1.56
SSF1P38789 MPS3YJL019W 2049 nt5.31□□□□□ -1.56
SSF1P38789 PCI8YIL071C 1335 nt5.31□□□□□ -1.56
SSF1P38789 ANR2YKL047W 1551 nt5.31□□□□□ -1.56
SSF1P38789 VAB2YEL005C 849 nt5.31□□□□□ -1.56
SSF1P38789 RIP1YEL024W 648 nt5.31□□□□□ -1.56
SSF1P38789 SPO73YER046W 432 nt5.31□□□□□ -1.56
SSF1P38789 LSO1YJR005C-A 282 nt5.31□□□□□ -1.56
SSF1P38789 RPL15BYMR121C 615 nt5.31□□□□□ -1.56
SSF1P38789 RPS19AYOL121C 435 nt5.31□□□□□ -1.56
SSF1P38789 CHK1YBR274W 1584 nt5.3□□□□□ -1.56
SSF1P38789 YDL016CYDL016C 303 nt5.3□□□□□ -1.56
SSF1P38789 YDR199WYDR199W 366 nt5.3□□□□□ -1.56
SSF1P38789 YAL047W-AYAL047W-A 330 nt5.3□□□□□ -1.56
SSF1P38789 PIR1YKL164C 1026 nt5.3□□□□□ -1.56
SSF1P38789 CSI2YOL007C 1026 nt5.3□□□□□ -1.56
SSF1P38789 SUS1YBR111W-A 291 nt5.3□□□□□ -1.56
SSF1P38789 FYV5YCL058C 459 nt5.3□□□□□ -1.56
SSF1P38789 TPO5YKL174C 1857 nt5.3□□□□□ -1.56
SSF1P38789 IZH3YLR023C 1632 nt5.3□□□□□ -1.56
SSF1P38789 LAS1YKR063C 1509 nt5.29□□□□□ -1.56
SSF1P38789 HUL5YGL141W 2733 nt5.29□□□□□ -1.56
SSF1P38789 YDL199CYDL199C 2064 nt5.29□□□□□ -1.56
SSF1P38789 YIL029CYIL029C 429 nt5.29□□□□□ -1.56
SSF1P38789 IRC18YJL037W 675 nt5.29□□□□□ -1.56
SSF1P38789 PRM6YML047C 1059 nt5.29□□□□□ -1.56
SSF1P38789 UBP12YJL197W 3765 nt5.28□□□□□ -1.56
SSF1P38789 YDR320W-BYDR320W-B 138 nt5.28□□□□□ -1.56
SSF1P38789 YDR340WYDR340W 303 nt5.28□□□□□ -1.56
SSF1P38789 TAM41YGR046W 1158 nt5.28□□□□□ -1.56
SSF1P38789 COX18YGR062C 951 nt5.28□□□□□ -1.56
SSF1P38789 OAR1YKL055C 837 nt5.28□□□□□ -1.56
SSF1P38789 SWC7YLR385C 399 nt5.28□□□□□ -1.56
SSF1P38789 YNL109WYNL109W 546 nt5.28□□□□□ -1.56
SSF1P38789 YPR170CYPR170C 336 nt5.28□□□□□ -1.56
SSF1P38789 YTA6YPL074W 2265 nt5.28□□□□□ -1.56
SSF1P38789 OAF3YKR064W 2592 nt5.28□□□□□ -1.56
SSF1P38789 DBP3YGL078C 1572 nt5.28□□□□□ -1.56
SSF1P38789 YML096WYML096W 1578 nt5.28□□□□□ -1.56
SSF1P38789 FUS2YMR232W 2034 nt5.28□□□□□ -1.56
SSF1P38789 FOX2YKR009C 2703 nt5.27□□□□□ -1.57
SSF1P38789 RPA14YDR156W 414 nt5.27□□□□□ -1.57
SSF1P38789 YER158CYER158C 1722 nt5.27□□□□□ -1.57
SSF1P38789 YFR010W-AYFR010W-A 189 nt5.27□□□□□ -1.57
SSF1P38789 CNN1YFR046C 1086 nt5.27□□□□□ -1.57
SSF1P38789 CIC1YHR052W 1131 nt5.27□□□□□ -1.57
SSF1P38789 YIL068W-AYIL068W-A 384 nt5.27□□□□□ -1.57
SSF1P38789 YOR203WYOR203W 354 nt5.27□□□□□ -1.57
SSF1P38789 SCD6YPR129W 1050 nt5.27□□□□□ -1.57
SSF1P38789 MET12YPL023C 1974 nt5.27□□□□□ -1.57
SSF1P38789 PCA1YBR295W 3651 nt5.27□□□□□ -1.57
SSF1P38789 YOL075CYOL075C 3885 nt5.26□□□□□ -1.57
SSF1P38789 PSY4YBL046W 1326 nt5.26□□□□□ -1.57
SSF1P38789 RSC3YDR303C 2658 nt5.26□□□□□ -1.57
SSF1P38789 ALO1YML086C 1581 nt5.26□□□□□ -1.57
SSF1P38789 YJL114WYJL114W 681 nt5.26□□□□□ -1.57
SSF1P38789 YNL276CYNL276C 396 nt5.26□□□□□ -1.57
SSF1P38789 YOR082CYOR082C 342 nt5.26□□□□□ -1.57
SSF1P38789 YPR012WYPR012W 255 nt5.26□□□□□ -1.57
SSF1P38789 KRE29YER038C 1395 nt5.26□□□□□ -1.57
SSF1P38789 RNA14YMR061W 2034 nt5.26□□□□□ -1.57
SSF1P38789 DAP2YHR028C 2457 nt5.25□□□□□ -1.57
SSF1P38789 YDL163WYDL163W 303 nt5.25□□□□□ -1.57
SSF1P38789 FIN1YDR130C 876 nt5.25□□□□□ -1.57
SSF1P38789 MIG3YER028C 1185 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)CtK(CUU)C 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)D1tK(CUU)D1 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)D2tK(CUU)D2 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)E1tK(CUU)E1 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)E2tK(CUU)E2 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)FtK(CUU)F 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)G1tK(CUU)G1 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)G2tK(CUU)G2 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)G3tK(CUU)G3 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)ItK(CUU)I 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)JtK(CUU)J 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)KtK(CUU)K 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)MtK(CUU)M 73 nt5.25□□□□□ -1.57
SSF1P38789 tK(CUU)PtK(CUU)P 73 nt5.25□□□□□ -1.57
SSF1P38789 YGR045CYGR045C 363 nt5.25□□□□□ -1.57
SSF1P38789 GOS1YHL031C 672 nt5.25□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms