Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.83■□□□□ 0.93
VARSP26640 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VARSP26640 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARSP26640 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VARSP26640 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
VARSP26640 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VARSP26640 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
VARSP26640 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VARSP26640 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.83■□□□□ 0.92
VARSP26640 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VARSP26640 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VARSP26640 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARSP26640 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARSP26640 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARSP26640 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.82■□□□□ 0.92
VARSP26640 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VARSP26640 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VARSP26640 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.82■□□□□ 0.92
VARSP26640 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VARSP26640 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.82■□□□□ 0.92
VARSP26640 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.82■□□□□ 0.92
VARSP26640 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.82■□□□□ 0.92
VARSP26640 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
VARSP26640 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VARSP26640 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VARSP26640 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.82■□□□□ 0.92
VARSP26640 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VARSP26640 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.82■□□□□ 0.92
VARSP26640 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARSP26640 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARSP26640 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VARSP26640 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARSP26640 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARSP26640 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
VARSP26640 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.81■□□□□ 0.92
VARSP26640 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
VARSP26640 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.81■□□□□ 0.92
VARSP26640 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
VARSP26640 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARSP26640 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.81■□□□□ 0.92
VARSP26640 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARSP26640 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
VARSP26640 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.8■□□□□ 0.92
VARSP26640 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.8■□□□□ 0.92
VARSP26640 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.8■□□□□ 0.92
VARSP26640 IGHV3-19-201ENST00000521488 291 ntBASIC20.8■□□□□ 0.92
VARSP26640 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.8■□□□□ 0.92
VARSP26640 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VARSP26640 AC026310.3-201ENST00000625186 2373 ntBASIC20.8■□□□□ 0.92
VARSP26640 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.79■□□□□ 0.92
VARSP26640 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.79■□□□□ 0.92
VARSP26640 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.79■□□□□ 0.92
VARSP26640 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARSP26640 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARSP26640 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARSP26640 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.79■□□□□ 0.92
VARSP26640 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VARSP26640 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VARSP26640 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARSP26640 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARSP26640 PKD1P6-201ENST00000343738 4769 ntBASIC20.79■□□□□ 0.92
VARSP26640 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.79■□□□□ 0.92
VARSP26640 TSPY26P-201ENST00000476365 1326 ntBASIC20.78■□□□□ 0.92
VARSP26640 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.78■□□□□ 0.92
VARSP26640 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.78■□□□□ 0.92
VARSP26640 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.78■□□□□ 0.92
VARSP26640 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VARSP26640 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VARSP26640 AL391422.3-201ENST00000603791 2761 ntBASIC20.78■□□□□ 0.92
VARSP26640 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARSP26640 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
VARSP26640 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.77■□□□□ 0.92
VARSP26640 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 AC034268.1-201ENST00000441047 882 ntBASIC20.77■□□□□ 0.92
VARSP26640 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.77■□□□□ 0.92
VARSP26640 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.77■□□□□ 0.92
VARSP26640 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARSP26640 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VARSP26640 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
VARSP26640 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VARSP26640 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms