Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 GAD1YMR250W 1758 nt4.47□□□□□ -1.69
MSH2P25847 TSR1YDL060W 2367 nt4.47□□□□□ -1.69
MSH2P25847 RPS18AYDR450W 441 nt4.46□□□□□ -1.7
MSH2P25847 YHR097CYHR097C 1101 nt4.46□□□□□ -1.7
MSH2P25847 YIL021C-AYIL021C-A 270 nt4.46□□□□□ -1.7
MSH2P25847 SNX4YJL036W 1272 nt4.46□□□□□ -1.7
MSH2P25847 YLR456WYLR456W 615 nt4.46□□□□□ -1.7
MSH2P25847 GIM5YML094W 492 nt4.46□□□□□ -1.7
MSH2P25847 RLP7YNL002C 969 nt4.46□□□□□ -1.7
MSH2P25847 RPA43YOR340C 981 nt4.46□□□□□ -1.7
MSH2P25847 YBR071WYBR071W 636 nt4.46□□□□□ -1.7
MSH2P25847 MET4YNL103W 2019 nt4.46□□□□□ -1.7
MSH2P25847 SLF1YDR515W 1344 nt4.46□□□□□ -1.7
MSH2P25847 PRM15YMR278W 1869 nt4.45□□□□□ -1.7
MSH2P25847 YBP2YGL060W 1926 nt4.45□□□□□ -1.7
MSH2P25847 YDR381C-AYDR381C-A 345 nt4.45□□□□□ -1.7
MSH2P25847 YIR014WYIR014W 729 nt4.45□□□□□ -1.7
MSH2P25847 AIM22YJL046W 1230 nt4.45□□□□□ -1.7
MSH2P25847 APQ13YJL075C 417 nt4.45□□□□□ -1.7
MSH2P25847 RPL14AYKL006W 417 nt4.45□□□□□ -1.7
MSH2P25847 ERP1YAR002C-A 660 nt4.45□□□□□ -1.7
MSH2P25847 INP1YMR204C 1263 nt4.45□□□□□ -1.7
MSH2P25847 MPP6YNR024W 561 nt4.45□□□□□ -1.7
MSH2P25847 HUB1YNR032C-A 222 nt4.45□□□□□ -1.7
MSH2P25847 RPS19AYOL121C 435 nt4.45□□□□□ -1.7
MSH2P25847 TRS85YDR108W 2097 nt4.45□□□□□ -1.7
MSH2P25847 VAC7YNL054W 3498 nt4.44□□□□□ -1.7
MSH2P25847 CLB3YDL155W 1284 nt4.44□□□□□ -1.7
MSH2P25847 YGR109W-AYGR109W-A 873 nt4.44□□□□□ -1.7
MSH2P25847 RPS4BYHR203C 786 nt4.44□□□□□ -1.7
MSH2P25847 YIL082WYIL082W 873 nt4.44□□□□□ -1.7
MSH2P25847 EMC2YJR088C 879 nt4.44□□□□□ -1.7
MSH2P25847 SFT1YKL006C-A 294 nt4.44□□□□□ -1.7
MSH2P25847 YKR011CYKR011C 1062 nt4.44□□□□□ -1.7
MSH2P25847 YOR203WYOR203W 354 nt4.44□□□□□ -1.7
MSH2P25847 YLR446WYLR446W 1302 nt4.44□□□□□ -1.7
MSH2P25847 TAF8YML114C 1533 nt4.43□□□□□ -1.7
MSH2P25847 RRP42YDL111C 798 nt4.43□□□□□ -1.7
MSH2P25847 SLU7YDR088C 1149 nt4.43□□□□□ -1.7
MSH2P25847 YIL165CYIL165C 360 nt4.43□□□□□ -1.7
MSH2P25847 BUD19YJL188C 309 nt4.43□□□□□ -1.7
MSH2P25847 UTP11YKL099C 753 nt4.43□□□□□ -1.7
MSH2P25847 SEC14YMR079W 915 nt4.43□□□□□ -1.7
MSH2P25847 YOR387CYOR387C 621 nt4.43□□□□□ -1.7
MSH2P25847 YPL077CYPL077C 723 nt4.43□□□□□ -1.7
MSH2P25847 RRN7YJL025W 1545 nt4.42□□□□□ -1.7
MSH2P25847 GDH2YDL215C 3279 nt4.42□□□□□ -1.7
MSH2P25847 YFR010W-AYFR010W-A 189 nt4.42□□□□□ -1.7
MSH2P25847 PRS3YHL011C 963 nt4.42□□□□□ -1.7
MSH2P25847 YHL048C-AYHL048C-A 135 nt4.42□□□□□ -1.7
MSH2P25847 LOH1YJL038C 660 nt4.42□□□□□ -1.7
MSH2P25847 TPK3YKL166C 1197 nt4.42□□□□□ -1.7
MSH2P25847 ISA1YLL027W 753 nt4.42□□□□□ -1.7
MSH2P25847 RLP24YLR009W 600 nt4.42□□□□□ -1.7
MSH2P25847 YLR152CYLR152C 1731 nt4.42□□□□□ -1.7
MSH2P25847 snR24snR24 89 nt4.42□□□□□ -1.7
MSH2P25847 TOG1YER184C 2385 nt4.42□□□□□ -1.7
MSH2P25847 VPS17YOR132W 1656 nt4.41□□□□□ -1.7
MSH2P25847 UPC2YDR213W 2742 nt4.41□□□□□ -1.7
MSH2P25847 YDR320W-BYDR320W-B 138 nt4.41□□□□□ -1.7
MSH2P25847 RPL8AYHL033C 771 nt4.41□□□□□ -1.7
MSH2P25847 CNB1YKL190W 528 nt4.41□□□□□ -1.7
MSH2P25847 COQ9YLR201C 783 nt4.41□□□□□ -1.7
MSH2P25847 YMR187CYMR187C 1296 nt4.41□□□□□ -1.7
MSH2P25847 ERG9YHR190W 1335 nt4.41□□□□□ -1.7
MSH2P25847 VPS33YLR396C 2076 nt4.41□□□□□ -1.7
MSH2P25847 MIP6YHR015W 1980 nt4.4□□□□□ -1.7
MSH2P25847 SNF2YOR290C 5112 nt4.4□□□□□ -1.7
MSH2P25847 TMA17YDL110C 453 nt4.4□□□□□ -1.71
MSH2P25847 YDR461C-AYDR461C-A 243 nt4.4□□□□□ -1.71
MSH2P25847 YJL114WYJL114W 681 nt4.4□□□□□ -1.71
MSH2P25847 ARF3YOR094W 552 nt4.4□□□□□ -1.71
MSH2P25847 IDH2YOR136W 1110 nt4.4□□□□□ -1.71
MSH2P25847 YPL119C-AYPL119C-A 264 nt4.4□□□□□ -1.71
MSH2P25847 YBR103C-AYBR103C-A 144 nt4.4□□□□□ -1.71
MSH2P25847 ADF1YCL058W-A 342 nt4.4□□□□□ -1.71
MSH2P25847 RAD1YPL022W 3303 nt4.4□□□□□ -1.71
MSH2P25847 YDR210W-AYDR210W-A 1317 nt4.4□□□□□ -1.71
MSH2P25847 MFB1YDR219C 1398 nt4.4□□□□□ -1.71
MSH2P25847 YKL075CYKL075C 1353 nt4.4□□□□□ -1.71
MSH2P25847 ARP5YNL059C 2268 nt4.39□□□□□ -1.71
MSH2P25847 MCP2YLR253W 1710 nt4.39□□□□□ -1.71
MSH2P25847 NSE4YDL105W 1209 nt4.39□□□□□ -1.71
MSH2P25847 HOM2YDR158W 1098 nt4.39□□□□□ -1.71
MSH2P25847 ATP6Q0085 780 nt4.39□□□□□ -1.71
MSH2P25847 VAR1Q0140 1197 nt4.39□□□□□ -1.71
MSH2P25847 TAM41YGR046W 1158 nt4.39□□□□□ -1.71
MSH2P25847 GMC2YLR445W 567 nt4.39□□□□□ -1.71
MSH2P25847 RPL18BYNL301C 561 nt4.39□□□□□ -1.71
MSH2P25847 RPL18AYOL120C 561 nt4.39□□□□□ -1.71
MSH2P25847 TRS20YBR254C 528 nt4.39□□□□□ -1.71
MSH2P25847 FYV5YCL058C 459 nt4.39□□□□□ -1.71
MSH2P25847 EMP47YFL048C 1338 nt4.39□□□□□ -1.71
MSH2P25847 RTT109YLL002W 1311 nt4.39□□□□□ -1.71
MSH2P25847 YMR221CYMR221C 1515 nt4.38□□□□□ -1.71
MSH2P25847 YCR085WYCR085W 354 nt4.38□□□□□ -1.71
MSH2P25847 snR68snR68 136 nt4.38□□□□□ -1.71
MSH2P25847 RPS29BYDL061C 171 nt4.38□□□□□ -1.71
MSH2P25847 AIM7YDR063W 450 nt4.38□□□□□ -1.71
MSH2P25847 MFA1YDR461W 111 nt4.38□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms