Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 WHI3YNL197C 1986 nt4.02□□□□□ -1.77
MSH1P25846 CDC5YMR001C 2118 nt4.01□□□□□ -1.77
MSH1P25846 TVP15YDR100W 432 nt4.01□□□□□ -1.77
MSH1P25846 MIG2YGL209W 1149 nt4.01□□□□□ -1.77
MSH1P25846 YHL044WYHL044W 708 nt4.01□□□□□ -1.77
MSH1P25846 UTP11YKL099C 753 nt4.01□□□□□ -1.77
MSH1P25846 YML116W-AYML116W-A 303 nt4.01□□□□□ -1.77
MSH1P25846 RFC5YBR087W 1065 nt4.01□□□□□ -1.77
MSH1P25846 CWH43YCR017C 2862 nt4.01□□□□□ -1.77
MSH1P25846 ENP2YGR145W 2124 nt4.01□□□□□ -1.77
MSH1P25846 EMC1YCL045C 2283 nt4.01□□□□□ -1.77
MSH1P25846 GPI1YGR216C 1830 nt4□□□□□ -1.77
MSH1P25846 VPS38YLR360W 1320 nt4□□□□□ -1.77
MSH1P25846 STE2YFL026W 1296 nt4□□□□□ -1.77
MSH1P25846 NDL1YLR254C 570 nt4□□□□□ -1.77
MSH1P25846 YMR087WYMR087W 855 nt4□□□□□ -1.77
MSH1P25846 YOR131CYOR131C 657 nt4□□□□□ -1.77
MSH1P25846 SMC3YJL074C 3693 nt3.99□□□□□ -1.77
MSH1P25846 IMD4YML056C 1575 nt3.99□□□□□ -1.77
MSH1P25846 LRS4YDR439W 1044 nt3.99□□□□□ -1.77
MSH1P25846 PEF1YGR058W 1008 nt3.99□□□□□ -1.77
MSH1P25846 YAL004WYAL004W 648 nt3.99□□□□□ -1.77
MSH1P25846 EMC2YJR088C 879 nt3.99□□□□□ -1.77
MSH1P25846 PCD1YLR151C 1023 nt3.99□□□□□ -1.77
MSH1P25846 NBP1YLR457C 960 nt3.99□□□□□ -1.77
MSH1P25846 TPT1YOL102C 693 nt3.99□□□□□ -1.77
MSH1P25846 SME1YOR159C 285 nt3.99□□□□□ -1.77
MSH1P25846 SEC27YGL137W 2670 nt3.99□□□□□ -1.77
MSH1P25846 SMI1YGR229C 1518 nt3.99□□□□□ -1.77
MSH1P25846 NRP1YDL167C 2160 nt3.99□□□□□ -1.77
MSH1P25846 PKP2YGL059W 1476 nt3.98□□□□□ -1.77
MSH1P25846 AEP2YMR282C 1743 nt3.98□□□□□ -1.77
MSH1P25846 IMH1YLR309C 2736 nt3.98□□□□□ -1.77
MSH1P25846 RRP42YDL111C 798 nt3.98□□□□□ -1.77
MSH1P25846 YDL228CYDL228C 642 nt3.98□□□□□ -1.77
MSH1P25846 ATC1YDR184C 885 nt3.98□□□□□ -1.77
MSH1P25846 YDR464C-AYDR464C-A 189 nt3.98□□□□□ -1.77
MSH1P25846 TAM41YGR046W 1158 nt3.98□□□□□ -1.77
MSH1P25846 GTR2YGR163W 1026 nt3.98□□□□□ -1.77
MSH1P25846 tV(CAC)DtV(CAC)D 73 nt3.98□□□□□ -1.77
MSH1P25846 tV(CAC)HtV(CAC)H 73 nt3.98□□□□□ -1.77
MSH1P25846 HIS5YIL116W 1158 nt3.98□□□□□ -1.77
MSH1P25846 GPX1YKL026C 504 nt3.98□□□□□ -1.77
MSH1P25846 SUB1YMR039C 879 nt3.98□□□□□ -1.77
MSH1P25846 RAD14YMR201C 1116 nt3.98□□□□□ -1.77
MSH1P25846 RET3YPL010W 570 nt3.98□□□□□ -1.77
MSH1P25846 YPL135C-AYPL135C-A 174 nt3.98□□□□□ -1.77
MSH1P25846 RPL19AYBR084C-A 570 nt3.98□□□□□ -1.77
MSH1P25846 KRE29YER038C 1395 nt3.98□□□□□ -1.77
MSH1P25846 TAF6YGL112C 1551 nt3.97□□□□□ -1.77
MSH1P25846 FAR8YMR029C 1572 nt3.97□□□□□ -1.77
MSH1P25846 MIP6YHR015W 1980 nt3.97□□□□□ -1.77
MSH1P25846 SOD1YJR104C 465 nt3.97□□□□□ -1.77
MSH1P25846 YLR108CYLR108C 1458 nt3.97□□□□□ -1.77
MSH1P25846 RTT109YLL002W 1311 nt3.96□□□□□ -1.77
MSH1P25846 TCB3YML072C 4638 nt3.96□□□□□ -1.77
MSH1P25846 NUP159YIL115C 4383 nt3.96□□□□□ -1.77
MSH1P25846 THR4YCR053W 1545 nt3.96□□□□□ -1.78
MSH1P25846 URK1YNR012W 1506 nt3.96□□□□□ -1.78
MSH1P25846 SEC2YNL272C 2280 nt3.96□□□□□ -1.78
MSH1P25846 TRX3YCR083W 384 nt3.96□□□□□ -1.78
MSH1P25846 YDR230WYDR230W 348 nt3.96□□□□□ -1.78
MSH1P25846 YHR097CYHR097C 1101 nt3.96□□□□□ -1.78
MSH1P25846 ECM9YKR004C 1134 nt3.96□□□□□ -1.78
MSH1P25846 SRL4YPL033C 846 nt3.96□□□□□ -1.78
MSH1P25846 GWT1YJL091C 1473 nt3.96□□□□□ -1.78
MSH1P25846 KRE5YOR336W 4098 nt3.96□□□□□ -1.78
MSH1P25846 ISM1YPL040C 3009 nt3.96□□□□□ -1.78
MSH1P25846 ARO80YDR421W 2853 nt3.96□□□□□ -1.78
MSH1P25846 SPT16YGL207W 3108 nt3.95□□□□□ -1.78
MSH1P25846 NTA1YJR062C 1374 nt3.95□□□□□ -1.78
MSH1P25846 YFL065CYFL065C 309 nt3.95□□□□□ -1.78
MSH1P25846 SCM4YGR049W 564 nt3.95□□□□□ -1.78
MSH1P25846 COX2Q0250 756 nt3.95□□□□□ -1.78
MSH1P25846 YHR182C-AYHR182C-A 474 nt3.95□□□□□ -1.78
MSH1P25846 RGI2YIL057C 495 nt3.95□□□□□ -1.78
MSH1P25846 YKL065W-AYKL065W-A 222 nt3.95□□□□□ -1.78
MSH1P25846 COQ9YLR201C 783 nt3.95□□□□□ -1.78
MSH1P25846 URA2YJL130C 6645 nt3.95□□□□□ -1.78
MSH1P25846 BUD27YFL023W 2391 nt3.95□□□□□ -1.78
MSH1P25846 VIP1YLR410W 3441 nt3.94□□□□□ -1.78
MSH1P25846 PIN4YBL051C 2007 nt3.94□□□□□ -1.78
MSH1P25846 DAN4YJR151C 3486 nt3.94□□□□□ -1.78
MSH1P25846 IRC22YEL001C 678 nt3.94□□□□□ -1.78
MSH1P25846 YJR111CYJR111C 852 nt3.94□□□□□ -1.78
MSH1P25846 NNF1YJR112W 606 nt3.94□□□□□ -1.78
MSH1P25846 BET5YML077W 480 nt3.94□□□□□ -1.78
MSH1P25846 YBL055CYBL055C 1257 nt3.94□□□□□ -1.78
MSH1P25846 YSF3YNL138W-A 258 nt3.94□□□□□ -1.78
MSH1P25846 ARL1YBR164C 552 nt3.94□□□□□ -1.78
MSH1P25846 RIB5YBR256C 717 nt3.94□□□□□ -1.78
MSH1P25846 ERB1YMR049C 2424 nt3.93□□□□□ -1.78
MSH1P25846 YDR042CYDR042C 603 nt3.93□□□□□ -1.78
MSH1P25846 YHR032C-AYHR032C-A 120 nt3.93□□□□□ -1.78
MSH1P25846 PBA1YLR199C 831 nt3.93□□□□□ -1.78
MSH1P25846 YLR217WYLR217W 324 nt3.93□□□□□ -1.78
MSH1P25846 INN1YNL152W 1230 nt3.93□□□□□ -1.78
MSH1P25846 Q0017Q0017 162 nt3.93□□□□□ -1.78
MSH1P25846 RNT1YMR239C 1416 nt3.93□□□□□ -1.78
MSH1P25846 SUC2YIL162W 1599 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 49.4 ms