Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHMP24386 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP24386 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHMP24386 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.82■□□□□ 0.76
CHMP24386 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP24386 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP24386 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHMP24386 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP24386 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP24386 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.82■□□□□ 0.76
CHMP24386 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP24386 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP24386 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP24386 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP24386 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP24386 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHMP24386 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP24386 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHMP24386 AL031602.1-201ENST00000633169 911 ntBASIC19.81■□□□□ 0.76
CHMP24386 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CHMP24386 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CHMP24386 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP24386 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP24386 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP24386 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP24386 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP24386 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP24386 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP24386 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP24386 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP24386 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.8■□□□□ 0.76
CHMP24386 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHMP24386 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
CHMP24386 RARRES2P6-201ENST00000567333 442 ntBASIC19.8■□□□□ 0.76
CHMP24386 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 AC087239.1-201ENST00000622671 572 ntBASIC19.8■□□□□ 0.76
CHMP24386 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP24386 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CHMP24386 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHMP24386 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP24386 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP24386 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP24386 MIR572-201ENST00000384983 95 ntBASIC19.79■□□□□ 0.76
CHMP24386 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP24386 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP24386 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.78■□□□□ 0.76
CHMP24386 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHMP24386 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHMP24386 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP24386 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP24386 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP24386 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHMP24386 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP24386 Z98882.1-201ENST00000622160 2253 ntBASIC19.77■□□□□ 0.75
CHMP24386 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHMP24386 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP24386 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP24386 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 AC073130.3-201ENST00000624389 2278 ntBASIC19.76■□□□□ 0.75
CHMP24386 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP24386 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms