Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.93■□□□□ 0.94
RBP1P09455 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RBP1P09455 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBP1P09455 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RBP1P09455 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.92■□□□□ 0.94
RBP1P09455 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.92■□□□□ 0.94
RBP1P09455 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.92■□□□□ 0.94
RBP1P09455 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.92■□□□□ 0.94
RBP1P09455 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBP1P09455 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.92■□□□□ 0.94
RBP1P09455 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RBP1P09455 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.91■□□□□ 0.94
RBP1P09455 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RBP1P09455 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RBP1P09455 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.9■□□□□ 0.94
RBP1P09455 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.9■□□□□ 0.94
RBP1P09455 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.9■□□□□ 0.94
RBP1P09455 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.9■□□□□ 0.94
RBP1P09455 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.9■□□□□ 0.94
RBP1P09455 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
RBP1P09455 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.9■□□□□ 0.94
RBP1P09455 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.9■□□□□ 0.94
RBP1P09455 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.9■□□□□ 0.94
RBP1P09455 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RBP1P09455 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RBP1P09455 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RBP1P09455 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RBP1P09455 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.9■□□□□ 0.94
RBP1P09455 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.9■□□□□ 0.94
RBP1P09455 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RBP1P09455 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RBP1P09455 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
RBP1P09455 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RBP1P09455 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RBP1P09455 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RBP1P09455 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RBP1P09455 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.89■□□□□ 0.93
RBP1P09455 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.89■□□□□ 0.93
RBP1P09455 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.89■□□□□ 0.93
RBP1P09455 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RBP1P09455 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RBP1P09455 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RBP1P09455 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RBP1P09455 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.89■□□□□ 0.93
RBP1P09455 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 AP006587.3-201ENST00000525742 1516 ntBASIC20.88■□□□□ 0.93
RBP1P09455 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RBP1P09455 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 BX842568.3-201ENST00000418104 571 ntBASIC20.88■□□□□ 0.93
RBP1P09455 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RBP1P09455 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.88■□□□□ 0.93
RBP1P09455 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
RBP1P09455 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
RBP1P09455 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RBP1P09455 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RBP1P09455 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.88■□□□□ 0.93
RBP1P09455 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RBP1P09455 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBP1P09455 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBP1P09455 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBP1P09455 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBP1P09455 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.87■□□□□ 0.93
RBP1P09455 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RBP1P09455 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms