Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPL3P09001 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRPL3P09001 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.05■□□□□ 0.64
MRPL3P09001 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL3P09001 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.05■□□□□ 0.64
MRPL3P09001 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL3P09001 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL3P09001 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRPL3P09001 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL3P09001 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL3P09001 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
MRPL3P09001 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
MRPL3P09001 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MRPL3P09001 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPL3P09001 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPL3P09001 MIR3181-201ENST00000578512 73 ntBASIC19.04■□□□□ 0.64
MRPL3P09001 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
MRPL3P09001 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL3P09001 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPL3P09001 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPL3P09001 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
MRPL3P09001 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL3P09001 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL3P09001 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.03■□□□□ 0.64
MRPL3P09001 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.03■□□□□ 0.64
MRPL3P09001 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL3P09001 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL3P09001 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MRPL3P09001 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL3P09001 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL3P09001 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.02■□□□□ 0.64
MRPL3P09001 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.02■□□□□ 0.64
MRPL3P09001 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.02■□□□□ 0.64
MRPL3P09001 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL3P09001 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
MRPL3P09001 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MRPL3P09001 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MRPL3P09001 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MRPL3P09001 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPL3P09001 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPL3P09001 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 OR2I1P-207ENST00000453522 948 ntBASIC19.01■□□□□ 0.63
MRPL3P09001 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 AC010525.1-201ENST00000585559 441 ntBASIC19.01■□□□□ 0.63
MRPL3P09001 AL356740.2-201ENST00000601559 647 ntBASIC19.01■□□□□ 0.63
MRPL3P09001 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 AC087239.1-201ENST00000622671 572 ntBASIC19.01■□□□□ 0.63
MRPL3P09001 AC068587.7-201ENST00000641602 218 ntBASIC19.01■□□□□ 0.63
MRPL3P09001 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MRPL3P09001 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL3P09001 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.01■□□□□ 0.63
MRPL3P09001 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MRPL3P09001 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MRPL3P09001 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19■□□□□ 0.63
MRPL3P09001 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19■□□□□ 0.63
MRPL3P09001 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19■□□□□ 0.63
MRPL3P09001 RASSF1-AS1-201ENST00000629828 790 ntBASIC19■□□□□ 0.63
MRPL3P09001 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19■□□□□ 0.63
MRPL3P09001 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
MRPL3P09001 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19■□□□□ 0.63
MRPL3P09001 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL3P09001 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19■□□□□ 0.63
MRPL3P09001 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL3P09001 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL3P09001 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL3P09001 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL3P09001 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.99■□□□□ 0.63
MRPL3P09001 AC010141.3-201ENST00000456659 717 ntBASIC18.99■□□□□ 0.63
MRPL3P09001 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.99■□□□□ 0.63
MRPL3P09001 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms