Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS1P07996 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
THBS1P07996 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS1P07996 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
THBS1P07996 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.58■□□□□ 0.72
THBS1P07996 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.58■□□□□ 0.72
THBS1P07996 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.58■□□□□ 0.72
THBS1P07996 AP001330.3-201ENST00000520123 633 ntBASIC19.58■□□□□ 0.72
THBS1P07996 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.58■□□□□ 0.72
THBS1P07996 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
THBS1P07996 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
THBS1P07996 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THBS1P07996 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.58■□□□□ 0.72
THBS1P07996 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
THBS1P07996 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.57■□□□□ 0.72
THBS1P07996 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
THBS1P07996 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
THBS1P07996 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 ZNRF2P3-201ENST00000424200 374 ntBASIC19.57■□□□□ 0.72
THBS1P07996 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
THBS1P07996 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
THBS1P07996 AL355001.2-201ENST00000620617 1191 ntBASIC19.57■□□□□ 0.72
THBS1P07996 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 AC009237.3-201ENST00000393279 1427 ntBASIC19.57■□□□□ 0.72
THBS1P07996 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.57■□□□□ 0.72
THBS1P07996 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THBS1P07996 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.57■□□□□ 0.72
THBS1P07996 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.56■□□□□ 0.72
THBS1P07996 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.56■□□□□ 0.72
THBS1P07996 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.56■□□□□ 0.72
THBS1P07996 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.56■□□□□ 0.72
THBS1P07996 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.56■□□□□ 0.72
THBS1P07996 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
THBS1P07996 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THBS1P07996 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
THBS1P07996 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
THBS1P07996 TSPY26P-201ENST00000476365 1326 ntBASIC19.55■□□□□ 0.72
THBS1P07996 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
THBS1P07996 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.55■□□□□ 0.72
THBS1P07996 AC005229.4-201ENST00000610085 2198 ntBASIC19.55■□□□□ 0.72
THBS1P07996 RASA4CP-201ENST00000424092 1398 ntBASIC19.55■□□□□ 0.72
THBS1P07996 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
THBS1P07996 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
THBS1P07996 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.54■□□□□ 0.72
THBS1P07996 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.54■□□□□ 0.72
THBS1P07996 MIR939-201ENST00000401314 82 ntBASIC19.54■□□□□ 0.72
THBS1P07996 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.54■□□□□ 0.72
THBS1P07996 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.54■□□□□ 0.72
THBS1P07996 AC142381.2-201ENST00000566120 298 ntBASIC19.54■□□□□ 0.72
THBS1P07996 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.54■□□□□ 0.72
THBS1P07996 AC105233.4-201ENST00000642045 216 ntBASIC19.54■□□□□ 0.72
THBS1P07996 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
THBS1P07996 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.53■□□□□ 0.72
THBS1P07996 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
THBS1P07996 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
THBS1P07996 AC091305.1-201ENST00000479476 895 ntBASIC19.53■□□□□ 0.72
THBS1P07996 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.53■□□□□ 0.72
THBS1P07996 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
THBS1P07996 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.53■□□□□ 0.72
THBS1P07996 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
THBS1P07996 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms