Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHGBP05060 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHGBP05060 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CHGBP05060 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHGBP05060 AC092666.2-201ENST00000613287 246 ntBASIC25.72■■□□□ 1.71
CHGBP05060 LINC00565-201ENST00000562710 2331 ntBASIC25.71■■□□□ 1.71
CHGBP05060 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.71■■□□□ 1.71
CHGBP05060 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.71■■□□□ 1.71
CHGBP05060 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.71■■□□□ 1.71
CHGBP05060 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CHGBP05060 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.71■■□□□ 1.71
CHGBP05060 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHGBP05060 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHGBP05060 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CHGBP05060 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CHGBP05060 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CHGBP05060 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.7■■□□□ 1.7
CHGBP05060 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.7■■□□□ 1.7
CHGBP05060 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.7■■□□□ 1.7
CHGBP05060 AL034346.1-201ENST00000568244 1277 ntBASIC25.7■■□□□ 1.7
CHGBP05060 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.7■■□□□ 1.7
CHGBP05060 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.7■■□□□ 1.7
CHGBP05060 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHGBP05060 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.69■■□□□ 1.7
CHGBP05060 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CHGBP05060 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CHGBP05060 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHGBP05060 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
CHGBP05060 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHGBP05060 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.69■■□□□ 1.7
CHGBP05060 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.69■■□□□ 1.7
CHGBP05060 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.69■■□□□ 1.7
CHGBP05060 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.69■■□□□ 1.7
CHGBP05060 AC104187.1-201ENST00000607510 612 ntBASIC25.69■■□□□ 1.7
CHGBP05060 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHGBP05060 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHGBP05060 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHGBP05060 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHGBP05060 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CHGBP05060 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.68■■□□□ 1.7
CHGBP05060 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.68■■□□□ 1.7
CHGBP05060 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.68■■□□□ 1.7
CHGBP05060 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.68■■□□□ 1.7
CHGBP05060 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.68■■□□□ 1.7
CHGBP05060 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CHGBP05060 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.68■■□□□ 1.7
CHGBP05060 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHGBP05060 KRT87P-202ENST00000534226 1464 ntBASIC25.67■■□□□ 1.7
CHGBP05060 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHGBP05060 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHGBP05060 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHGBP05060 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.67■■□□□ 1.7
CHGBP05060 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.67■■□□□ 1.7
CHGBP05060 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.67■■□□□ 1.7
CHGBP05060 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.67■■□□□ 1.7
CHGBP05060 FBXW4P1-201ENST00000426721 2239 ntBASIC25.67■■□□□ 1.7
CHGBP05060 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.67■■□□□ 1.7
CHGBP05060 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHGBP05060 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CHGBP05060 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.66■■□□□ 1.7
CHGBP05060 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.66■■□□□ 1.7
CHGBP05060 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.66■■□□□ 1.7
CHGBP05060 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.66■■□□□ 1.7
CHGBP05060 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.66■■□□□ 1.7
CHGBP05060 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms