Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.41■■□□□ 1.18
ERBB2P04626 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.41■■□□□ 1.18
ERBB2P04626 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ERBB2P04626 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
ERBB2P04626 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.41■■□□□ 1.18
ERBB2P04626 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ERBB2P04626 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.4■■□□□ 1.18
ERBB2P04626 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.4■■□□□ 1.18
ERBB2P04626 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 AC104564.3-201ENST00000582367 638 ntBASIC22.4■■□□□ 1.18
ERBB2P04626 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ERBB2P04626 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.4■■□□□ 1.18
ERBB2P04626 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.39■■□□□ 1.18
ERBB2P04626 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ERBB2P04626 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ERBB2P04626 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ERBB2P04626 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
ERBB2P04626 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ERBB2P04626 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.39■■□□□ 1.17
ERBB2P04626 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.39■■□□□ 1.17
ERBB2P04626 YBX1P1-201ENST00000445822 960 ntBASIC22.39■■□□□ 1.17
ERBB2P04626 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
ERBB2P04626 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.39■■□□□ 1.17
ERBB2P04626 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
ERBB2P04626 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.39■■□□□ 1.17
ERBB2P04626 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ERBB2P04626 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.39■■□□□ 1.17
ERBB2P04626 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ERBB2P04626 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.38■■□□□ 1.17
ERBB2P04626 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.38■■□□□ 1.17
ERBB2P04626 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 AC019069.1-201ENST00000610008 1333 ntBASIC22.38■■□□□ 1.17
ERBB2P04626 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ERBB2P04626 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ERBB2P04626 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.38■■□□□ 1.17
ERBB2P04626 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.38■■□□□ 1.17
ERBB2P04626 AC007375.3-201ENST00000600936 2314 ntBASIC22.38■■□□□ 1.17
ERBB2P04626 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
ERBB2P04626 LINC02228-203ENST00000641970 1355 ntBASIC22.38■■□□□ 1.17
ERBB2P04626 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
ERBB2P04626 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ERBB2P04626 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
ERBB2P04626 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.37■■□□□ 1.17
ERBB2P04626 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ERBB2P04626 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.37■■□□□ 1.17
ERBB2P04626 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ERBB2P04626 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ERBB2P04626 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.36■■□□□ 1.17
ERBB2P04626 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.36■■□□□ 1.17
ERBB2P04626 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.36■■□□□ 1.17
ERBB2P04626 AC123595.1-201ENST00000440769 1046 ntBASIC22.36■■□□□ 1.17
ERBB2P04626 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.36■■□□□ 1.17
ERBB2P04626 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.36■■□□□ 1.17
ERBB2P04626 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.36■■□□□ 1.17
ERBB2P04626 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
ERBB2P04626 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ERBB2P04626 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ERBB2P04626 Z98882.1-201ENST00000622160 2253 ntBASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms