Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.92■□□□□ 0.62
APOA1P02647 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
APOA1P02647 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
APOA1P02647 FEM1AP1-201ENST00000431297 1995 ntBASIC18.91■□□□□ 0.62
APOA1P02647 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOA1P02647 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.9■□□□□ 0.62
APOA1P02647 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.9■□□□□ 0.62
APOA1P02647 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
APOA1P02647 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.9■□□□□ 0.62
APOA1P02647 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.9■□□□□ 0.62
APOA1P02647 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
APOA1P02647 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.9■□□□□ 0.62
APOA1P02647 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.9■□□□□ 0.62
APOA1P02647 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
APOA1P02647 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.9■□□□□ 0.62
APOA1P02647 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 AC087289.5-201ENST00000586076 3175 ntBASIC18.9■□□□□ 0.62
APOA1P02647 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APOA1P02647 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
APOA1P02647 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.89■□□□□ 0.62
APOA1P02647 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
APOA1P02647 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA1P02647 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA1P02647 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA1P02647 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.89■□□□□ 0.61
APOA1P02647 SPCS2P3-201ENST00000500401 656 ntBASIC18.89■□□□□ 0.61
APOA1P02647 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA1P02647 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
APOA1P02647 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
APOA1P02647 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
APOA1P02647 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.89■□□□□ 0.61
APOA1P02647 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
APOA1P02647 LINC01960-201ENST00000563759 1884 ntBASIC18.88■□□□□ 0.61
APOA1P02647 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
APOA1P02647 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
APOA1P02647 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
APOA1P02647 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.88■□□□□ 0.61
APOA1P02647 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOA1P02647 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOA1P02647 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APOA1P02647 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.88■□□□□ 0.61
APOA1P02647 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
APOA1P02647 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.88■□□□□ 0.61
APOA1P02647 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
APOA1P02647 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.87■□□□□ 0.61
APOA1P02647 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
APOA1P02647 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.87■□□□□ 0.61
APOA1P02647 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.87■□□□□ 0.61
APOA1P02647 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.87■□□□□ 0.61
APOA1P02647 MIR6765-201ENST00000614092 87 ntBASIC18.87■□□□□ 0.61
APOA1P02647 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
APOA1P02647 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOA1P02647 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.86■□□□□ 0.61
APOA1P02647 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.86■□□□□ 0.61
APOA1P02647 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.86■□□□□ 0.61
APOA1P02647 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
APOA1P02647 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.86■□□□□ 0.61
APOA1P02647 AC004448.1-201ENST00000458332 883 ntBASIC18.86■□□□□ 0.61
APOA1P02647 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.86■□□□□ 0.61
APOA1P02647 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
APOA1P02647 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
APOA1P02647 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOA1P02647 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APOA1P02647 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
APOA1P02647 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.85■□□□□ 0.61
APOA1P02647 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms