Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.87■□□□□ 0.93
CPNE6O95741 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CPNE6O95741 CDCA4P2-201ENST00000441182 718 ntBASIC20.87■□□□□ 0.93
CPNE6O95741 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.87■□□□□ 0.93
CPNE6O95741 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.87■□□□□ 0.93
CPNE6O95741 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CPNE6O95741 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPNE6O95741 AC005224.4-201ENST00000583262 1652 ntBASIC20.86■□□□□ 0.93
CPNE6O95741 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE6O95741 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CPNE6O95741 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE6O95741 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE6O95741 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE6O95741 RAP2CP1-201ENST00000605103 478 ntBASIC20.86■□□□□ 0.93
CPNE6O95741 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE6O95741 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPNE6O95741 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE6O95741 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.86■□□□□ 0.93
CPNE6O95741 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE6O95741 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE6O95741 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE6O95741 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CPNE6O95741 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.85■□□□□ 0.93
CPNE6O95741 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CPNE6O95741 AC026185.1-201ENST00000445748 174 ntBASIC20.85■□□□□ 0.93
CPNE6O95741 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.85■□□□□ 0.93
CPNE6O95741 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CPNE6O95741 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPNE6O95741 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CPNE6O95741 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CPNE6O95741 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE6O95741 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE6O95741 HLA-L-209ENST00000420110 1011 ntBASIC20.84■□□□□ 0.93
CPNE6O95741 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE6O95741 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.84■□□□□ 0.93
CPNE6O95741 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE6O95741 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPNE6O95741 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.84■□□□□ 0.93
CPNE6O95741 ESRRAP2-201ENST00000418437 1549 ntBASIC20.83■□□□□ 0.93
CPNE6O95741 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
CPNE6O95741 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CPNE6O95741 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE6O95741 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE6O95741 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE6O95741 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE6O95741 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.83■□□□□ 0.93
CPNE6O95741 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.83■□□□□ 0.93
CPNE6O95741 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE6O95741 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.83■□□□□ 0.93
CPNE6O95741 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPNE6O95741 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPNE6O95741 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CPNE6O95741 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 KRT87P-202ENST00000534226 1464 ntBASIC20.82■□□□□ 0.92
CPNE6O95741 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE6O95741 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.82■□□□□ 0.92
CPNE6O95741 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.82■□□□□ 0.92
CPNE6O95741 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE6O95741 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.81■□□□□ 0.92
CPNE6O95741 LINC01960-201ENST00000563759 1884 ntBASIC20.81■□□□□ 0.92
CPNE6O95741 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPNE6O95741 AC242852.2-201ENST00000615738 1807 ntBASIC20.81■□□□□ 0.92
CPNE6O95741 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE6O95741 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.81■□□□□ 0.92
CPNE6O95741 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE6O95741 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE6O95741 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE6O95741 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE6O95741 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE6O95741 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CPNE6O95741 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.8■□□□□ 0.92
CPNE6O95741 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE6O95741 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE6O95741 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CPNE6O95741 AC011767.1-201ENST00000617410 1153 ntBASIC20.8■□□□□ 0.92
CPNE6O95741 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE6O95741 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms