Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 FAM197Y4-202ENST00000622692 608 ntBASIC32.41■■■□□ 2.78
RAPGEF3O95398 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RAPGEF3O95398 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC32.41■■■□□ 2.78
RAPGEF3O95398 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.4■■■□□ 2.78
RAPGEF3O95398 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC32.4■■■□□ 2.78
RAPGEF3O95398 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
RAPGEF3O95398 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
RAPGEF3O95398 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC32.4■■■□□ 2.78
RAPGEF3O95398 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RAPGEF3O95398 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RAPGEF3O95398 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
RAPGEF3O95398 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RAPGEF3O95398 CYP2T3P-201ENST00000601990 817 ntBASIC32.39■■■□□ 2.78
RAPGEF3O95398 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.39■■■□□ 2.78
RAPGEF3O95398 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
RAPGEF3O95398 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC32.39■■■□□ 2.78
RAPGEF3O95398 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RAPGEF3O95398 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC32.39■■■□□ 2.78
RAPGEF3O95398 RBM17P2-201ENST00000616397 1405 ntBASIC32.38■■■□□ 2.77
RAPGEF3O95398 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
RAPGEF3O95398 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.38■■■□□ 2.77
RAPGEF3O95398 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.38■■■□□ 2.77
RAPGEF3O95398 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC32.38■■■□□ 2.77
RAPGEF3O95398 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.38■■■□□ 2.77
RAPGEF3O95398 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC32.37■■■□□ 2.77
RAPGEF3O95398 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC32.37■■■□□ 2.77
RAPGEF3O95398 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC32.37■■■□□ 2.77
RAPGEF3O95398 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
RAPGEF3O95398 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
RAPGEF3O95398 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
RAPGEF3O95398 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC32.37■■■□□ 2.77
RAPGEF3O95398 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC32.37■■■□□ 2.77
RAPGEF3O95398 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
RAPGEF3O95398 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RAPGEF3O95398 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
RAPGEF3O95398 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF3O95398 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF3O95398 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF3O95398 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RAPGEF3O95398 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
RAPGEF3O95398 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.35■■■□□ 2.77
RAPGEF3O95398 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC32.35■■■□□ 2.77
RAPGEF3O95398 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RAPGEF3O95398 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC32.35■■■□□ 2.77
RAPGEF3O95398 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RAPGEF3O95398 KRT17P1-201ENST00000399211 1546 ntBASIC32.35■■■□□ 2.77
RAPGEF3O95398 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
RAPGEF3O95398 LSM12P1-201ENST00000411836 588 ntBASIC32.34■■■□□ 2.77
RAPGEF3O95398 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC32.34■■■□□ 2.77
RAPGEF3O95398 AC233263.1-201ENST00000578059 224 ntBASIC32.34■■■□□ 2.77
RAPGEF3O95398 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RAPGEF3O95398 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RAPGEF3O95398 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
RAPGEF3O95398 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC32.33■■■□□ 2.77
RAPGEF3O95398 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC32.33■■■□□ 2.77
RAPGEF3O95398 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
RAPGEF3O95398 SPIB-206ENST00000596074 847 ntTSL 2 BASIC32.33■■■□□ 2.77
RAPGEF3O95398 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
RAPGEF3O95398 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
RAPGEF3O95398 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
RAPGEF3O95398 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC32.32■■■□□ 2.76
RAPGEF3O95398 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF3O95398 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF3O95398 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF3O95398 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC32.32■■■□□ 2.76
RAPGEF3O95398 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.32■■■□□ 2.76
RAPGEF3O95398 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.32■■■□□ 2.76
RAPGEF3O95398 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF3O95398 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RAPGEF3O95398 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC32.32■■■□□ 2.76
RAPGEF3O95398 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RAPGEF3O95398 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RAPGEF3O95398 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RAPGEF3O95398 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 RN7SL471P-201ENST00000580476 299 ntBASIC32.31■■■□□ 2.76
RAPGEF3O95398 AC060766.5-201ENST00000590539 871 ntBASIC32.31■■■□□ 2.76
RAPGEF3O95398 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.31■■■□□ 2.76
RAPGEF3O95398 AP006587.3-201ENST00000525742 1516 ntBASIC32.31■■■□□ 2.76
RAPGEF3O95398 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF3O95398 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RAPGEF3O95398 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC32.3■■■□□ 2.76
RAPGEF3O95398 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms