Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC43A1O75387 TSPY26P-201ENST00000476365 1326 ntBASIC19.23■□□□□ 0.67
SLC43A1O75387 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SLC43A1O75387 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC43A1O75387 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC43A1O75387 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC43A1O75387 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SLC43A1O75387 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC43A1O75387 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.22■□□□□ 0.67
SLC43A1O75387 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC43A1O75387 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC43A1O75387 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC43A1O75387 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC43A1O75387 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLC43A1O75387 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC43A1O75387 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC43A1O75387 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 OR7E47P-201ENST00000546390 1422 ntBASIC19.21■□□□□ 0.67
SLC43A1O75387 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC43A1O75387 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC43A1O75387 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SLC43A1O75387 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC43A1O75387 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC43A1O75387 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC43A1O75387 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC43A1O75387 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC43A1O75387 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC43A1O75387 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC43A1O75387 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC43A1O75387 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC43A1O75387 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC43A1O75387 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC43A1O75387 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 RNF165-205ENST00000588679 2904 ntBASIC19.19■□□□□ 0.66
SLC43A1O75387 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC43A1O75387 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC43A1O75387 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC43A1O75387 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC43A1O75387 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC43A1O75387 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC43A1O75387 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC43A1O75387 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC43A1O75387 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SLC43A1O75387 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC43A1O75387 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC43A1O75387 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC43A1O75387 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC43A1O75387 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC43A1O75387 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SLC43A1O75387 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC43A1O75387 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC43A1O75387 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC43A1O75387 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC43A1O75387 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SLC43A1O75387 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms