Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KLHL41O60662 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KLHL41O60662 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KLHL41O60662 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KLHL41O60662 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.02■□□□□ 0.96
KLHL41O60662 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 FEM1AP4-201ENST00000443167 1987 ntBASIC21.01■□□□□ 0.95
KLHL41O60662 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.01■□□□□ 0.95
KLHL41O60662 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHL41O60662 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
KLHL41O60662 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 C17orf82-201ENST00000623772 1530 ntBASIC21.01■□□□□ 0.95
KLHL41O60662 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHL41O60662 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHL41O60662 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KLHL41O60662 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHL41O60662 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.01■□□□□ 0.95
KLHL41O60662 AC136469.2-201ENST00000623944 1028 ntBASIC21.01■□□□□ 0.95
KLHL41O60662 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHL41O60662 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21■□□□□ 0.95
KLHL41O60662 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21■□□□□ 0.95
KLHL41O60662 AL157384.1-201ENST00000445995 2473 ntBASIC21■□□□□ 0.95
KLHL41O60662 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21■□□□□ 0.95
KLHL41O60662 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21■□□□□ 0.95
KLHL41O60662 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL41O60662 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL41O60662 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
KLHL41O60662 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHL41O60662 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KLHL41O60662 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KLHL41O60662 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21■□□□□ 0.95
KLHL41O60662 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
KLHL41O60662 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
KLHL41O60662 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.99■□□□□ 0.95
KLHL41O60662 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.99■□□□□ 0.95
KLHL41O60662 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
KLHL41O60662 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KLHL41O60662 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHL41O60662 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KLHL41O60662 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.98■□□□□ 0.95
KLHL41O60662 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KLHL41O60662 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
KLHL41O60662 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.98■□□□□ 0.95
KLHL41O60662 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 AC092666.2-201ENST00000613287 246 ntBASIC20.98■□□□□ 0.95
KLHL41O60662 MIR6821-201ENST00000617625 74 ntBASIC20.98■□□□□ 0.95
KLHL41O60662 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KLHL41O60662 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KLHL41O60662 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.98■□□□□ 0.95
KLHL41O60662 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL41O60662 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
KLHL41O60662 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL41O60662 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KLHL41O60662 IRS3P-201ENST00000223076 1006 ntBASIC20.97■□□□□ 0.95
KLHL41O60662 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
KLHL41O60662 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.97■□□□□ 0.95
KLHL41O60662 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL41O60662 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL41O60662 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.97■□□□□ 0.95
KLHL41O60662 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.97■□□□□ 0.95
KLHL41O60662 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHL41O60662 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KLHL41O60662 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
KLHL41O60662 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KLHL41O60662 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms