Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.71■□□□□ 0.91
MGRN1O60291 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.71■□□□□ 0.91
MGRN1O60291 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MGRN1O60291 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.71■□□□□ 0.91
MGRN1O60291 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MGRN1O60291 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MGRN1O60291 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.7■□□□□ 0.9
MGRN1O60291 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.7■□□□□ 0.9
MGRN1O60291 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.7■□□□□ 0.9
MGRN1O60291 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.7■□□□□ 0.9
MGRN1O60291 AC139795.1-202ENST00000500444 432 ntBASIC20.7■□□□□ 0.9
MGRN1O60291 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MGRN1O60291 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.7■□□□□ 0.9
MGRN1O60291 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MGRN1O60291 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MGRN1O60291 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.7■□□□□ 0.9
MGRN1O60291 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MGRN1O60291 LETM1P2-201ENST00000597330 2178 ntBASIC20.69■□□□□ 0.9
MGRN1O60291 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 AC004987.1-201ENST00000428627 508 ntBASIC20.69■□□□□ 0.9
MGRN1O60291 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
MGRN1O60291 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MGRN1O60291 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MGRN1O60291 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
MGRN1O60291 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
MGRN1O60291 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MGRN1O60291 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.68■□□□□ 0.9
MGRN1O60291 DUX4L18-201ENST00000553347 1267 ntBASIC20.68■□□□□ 0.9
MGRN1O60291 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.68■□□□□ 0.9
MGRN1O60291 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MGRN1O60291 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MGRN1O60291 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.67■□□□□ 0.9
MGRN1O60291 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.67■□□□□ 0.9
MGRN1O60291 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MGRN1O60291 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.67■□□□□ 0.9
MGRN1O60291 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MGRN1O60291 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.67■□□□□ 0.9
MGRN1O60291 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MGRN1O60291 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MGRN1O60291 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
MGRN1O60291 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MGRN1O60291 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MGRN1O60291 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MGRN1O60291 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
MGRN1O60291 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MGRN1O60291 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
MGRN1O60291 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MGRN1O60291 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MGRN1O60291 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
MGRN1O60291 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.65■□□□□ 0.9
MGRN1O60291 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MGRN1O60291 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms