Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AP006587.3-201ENST00000525742 1516 ntBASIC20.32■□□□□ 0.84
PCDH7O60245 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH7O60245 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH7O60245 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH7O60245 AC003102.1-202ENST00000563394 1796 ntBASIC20.31■□□□□ 0.84
PCDH7O60245 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH7O60245 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH7O60245 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH7O60245 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH7O60245 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH7O60245 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH7O60245 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH7O60245 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDH7O60245 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH7O60245 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH7O60245 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH7O60245 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH7O60245 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH7O60245 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH7O60245 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH7O60245 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
PCDH7O60245 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH7O60245 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 AF213884.3-201ENST00000563833 479 ntBASIC20.3■□□□□ 0.84
PCDH7O60245 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH7O60245 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDH7O60245 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH7O60245 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDH7O60245 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH7O60245 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH7O60245 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH7O60245 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH7O60245 MIR939-201ENST00000401314 82 ntBASIC20.29■□□□□ 0.84
PCDH7O60245 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH7O60245 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDH7O60245 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDH7O60245 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDH7O60245 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH7O60245 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH7O60245 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH7O60245 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDH7O60245 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH7O60245 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PCDH7O60245 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH7O60245 RASA4CP-201ENST00000424092 1398 ntBASIC20.28■□□□□ 0.84
PCDH7O60245 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDH7O60245 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDH7O60245 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH7O60245 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH7O60245 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 AC091305.1-201ENST00000479476 895 ntBASIC20.27■□□□□ 0.84
PCDH7O60245 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDH7O60245 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDH7O60245 AC105233.4-201ENST00000642045 216 ntBASIC20.27■□□□□ 0.84
PCDH7O60245 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH7O60245 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH7O60245 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH7O60245 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDH7O60245 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH7O60245 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH7O60245 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH7O60245 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH7O60245 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH7O60245 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH7O60245 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH7O60245 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDH7O60245 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH7O60245 AL031432.3-201ENST00000607698 485 ntBASIC20.26■□□□□ 0.83
PCDH7O60245 AC005229.4-201ENST00000610085 2198 ntBASIC20.26■□□□□ 0.83
PCDH7O60245 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH7O60245 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH7O60245 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH7O60245 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH7O60245 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDH7O60245 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH7O60245 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH7O60245 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms