Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-8O15522 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NKX2-8O15522 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-8O15522 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-8O15522 DUSP5P2-201ENST00000426873 1033 ntBASIC19.75■□□□□ 0.75
NKX2-8O15522 AC097658.1-201ENST00000475555 843 ntBASIC19.75■□□□□ 0.75
NKX2-8O15522 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NKX2-8O15522 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.75■□□□□ 0.75
NKX2-8O15522 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-8O15522 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-8O15522 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.75■□□□□ 0.75
NKX2-8O15522 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NKX2-8O15522 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-8O15522 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-8O15522 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX2-8O15522 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-8O15522 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 ESRRAP1-201ENST00000400596 1257 ntBASIC19.74■□□□□ 0.75
NKX2-8O15522 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.74■□□□□ 0.75
NKX2-8O15522 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-8O15522 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-8O15522 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.74■□□□□ 0.75
NKX2-8O15522 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.74■□□□□ 0.75
NKX2-8O15522 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NKX2-8O15522 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
NKX2-8O15522 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-8O15522 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NKX2-8O15522 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX2-8O15522 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.73■□□□□ 0.75
NKX2-8O15522 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-8O15522 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.73■□□□□ 0.75
NKX2-8O15522 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-8O15522 MYC-209ENST00000641252 345 ntBASIC19.73■□□□□ 0.75
NKX2-8O15522 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-8O15522 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-8O15522 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-8O15522 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX2-8O15522 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NKX2-8O15522 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX2-8O15522 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-8O15522 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-8O15522 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NKX2-8O15522 POU5F1P4-201ENST00000413175 1085 ntBASIC19.72■□□□□ 0.75
NKX2-8O15522 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.72■□□□□ 0.75
NKX2-8O15522 AC098590.1-201ENST00000468126 897 ntBASIC19.72■□□□□ 0.75
NKX2-8O15522 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.72■□□□□ 0.75
NKX2-8O15522 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-8O15522 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-8O15522 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-8O15522 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX2-8O15522 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-8O15522 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-8O15522 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-8O15522 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-8O15522 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.71■□□□□ 0.75
NKX2-8O15522 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.71■□□□□ 0.75
NKX2-8O15522 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
NKX2-8O15522 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-8O15522 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-8O15522 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 AC010980.2-201ENST00000587099 1412 ntBASIC19.7■□□□□ 0.74
NKX2-8O15522 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NKX2-8O15522 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.7■□□□□ 0.74
NKX2-8O15522 AC091874.3-201ENST00000512672 1195 ntBASIC19.7■□□□□ 0.74
NKX2-8O15522 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-8O15522 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.7■□□□□ 0.74
NKX2-8O15522 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.7■□□□□ 0.74
NKX2-8O15522 AL591742.1-201ENST00000604433 565 ntBASIC19.7■□□□□ 0.74
NKX2-8O15522 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-8O15522 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NKX2-8O15522 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-8O15522 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms