Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MID1O15344 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.37■■□□□ 1.01
MID1O15344 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MID1O15344 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
MID1O15344 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.36■■□□□ 1.01
MID1O15344 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MID1O15344 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.36■■□□□ 1.01
MID1O15344 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MID1O15344 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.36■■□□□ 1.01
MID1O15344 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.36■■□□□ 1.01
MID1O15344 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MID1O15344 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MID1O15344 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MID1O15344 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.35■■□□□ 1.01
MID1O15344 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.35■■□□□ 1.01
MID1O15344 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 CNN2P6-201ENST00000439038 900 ntBASIC21.35■■□□□ 1.01
MID1O15344 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.35■■□□□ 1.01
MID1O15344 AL121832.2-201ENST00000610979 668 ntBASIC21.35■■□□□ 1.01
MID1O15344 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MID1O15344 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.34■■□□□ 1.01
MID1O15344 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.34■■□□□ 1.01
MID1O15344 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
MID1O15344 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.34■■□□□ 1.01
MID1O15344 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.34■■□□□ 1.01
MID1O15344 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.34■■□□□ 1.01
MID1O15344 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.34■■□□□ 1.01
MID1O15344 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.34■■□□□ 1.01
MID1O15344 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
MID1O15344 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
MID1O15344 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.34■■□□□ 1.01
MID1O15344 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
MID1O15344 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
MID1O15344 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MID1O15344 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.33■■□□□ 1.01
MID1O15344 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.33■■□□□ 1.01
MID1O15344 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
MID1O15344 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
MID1O15344 AC083906.2-201ENST00000511578 360 ntBASIC21.33■■□□□ 1.01
MID1O15344 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.33■■□□□ 1.01
MID1O15344 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
MID1O15344 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MID1O15344 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MID1O15344 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
MID1O15344 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.33■■□□□ 1
MID1O15344 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.33■■□□□ 1
MID1O15344 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.33■■□□□ 1
MID1O15344 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MID1O15344 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 AC080038.3-201ENST00000623346 1952 ntBASIC21.32■■□□□ 1
MID1O15344 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.32■■□□□ 1
MID1O15344 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MID1O15344 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.32■■□□□ 1
MID1O15344 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.32■■□□□ 1
MID1O15344 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.32■■□□□ 1
MID1O15344 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MID1O15344 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.32■■□□□ 1
MID1O15344 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
MID1O15344 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.31■■□□□ 1
MID1O15344 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.31■■□□□ 1
MID1O15344 SLC7A5P1-201ENST00000568957 537 ntBASIC21.31■■□□□ 1
MID1O15344 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.31■■□□□ 1
MID1O15344 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MID1O15344 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.31■■□□□ 1
MID1O15344 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.31■■□□□ 1
MID1O15344 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.3■■□□□ 1
MID1O15344 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MID1O15344 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.3■■□□□ 1
MID1O15344 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.3■■□□□ 1
MID1O15344 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.3■■□□□ 1
MID1O15344 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.3■■□□□ 1
MID1O15344 AC008175.2-201ENST00000612840 297 ntBASIC21.3■■□□□ 1
MID1O15344 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.3■■□□□ 1
MID1O15344 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms