Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.19■□□□□ 0.66
SURF4O15260 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SURF4O15260 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SURF4O15260 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SURF4O15260 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.18■□□□□ 0.66
SURF4O15260 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.18■□□□□ 0.66
SURF4O15260 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.18■□□□□ 0.66
SURF4O15260 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.18■□□□□ 0.66
SURF4O15260 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SURF4O15260 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.18■□□□□ 0.66
SURF4O15260 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SURF4O15260 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SURF4O15260 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SURF4O15260 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SURF4O15260 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.17■□□□□ 0.66
SURF4O15260 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.17■□□□□ 0.66
SURF4O15260 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SURF4O15260 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.17■□□□□ 0.66
SURF4O15260 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SURF4O15260 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SURF4O15260 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
SURF4O15260 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SURF4O15260 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SURF4O15260 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.16■□□□□ 0.66
SURF4O15260 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SURF4O15260 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SURF4O15260 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.16■□□□□ 0.66
SURF4O15260 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SURF4O15260 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SURF4O15260 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SURF4O15260 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.15■□□□□ 0.66
SURF4O15260 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 AL049796.1-201ENST00000565336 1766 ntBASIC19.15■□□□□ 0.66
SURF4O15260 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SURF4O15260 SRD5A1P1-201ENST00000442297 786 ntBASIC19.15■□□□□ 0.66
SURF4O15260 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.15■□□□□ 0.66
SURF4O15260 AL034346.1-201ENST00000568244 1277 ntBASIC19.15■□□□□ 0.66
SURF4O15260 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.15■□□□□ 0.66
SURF4O15260 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.15■□□□□ 0.66
SURF4O15260 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SURF4O15260 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SURF4O15260 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SURF4O15260 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SURF4O15260 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SURF4O15260 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 AC131281.2-201ENST00000520478 145 ntBASIC19.14■□□□□ 0.65
SURF4O15260 AC010525.1-201ENST00000585559 441 ntBASIC19.14■□□□□ 0.65
SURF4O15260 AC092171.4-201ENST00000609130 632 ntBASIC19.14■□□□□ 0.65
SURF4O15260 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SURF4O15260 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.14■□□□□ 0.65
SURF4O15260 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SURF4O15260 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms