Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC35.12■■■■□ 3.21
CHD1O14646 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CHD1O14646 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC35.12■■■■□ 3.21
CHD1O14646 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC35.12■■■■□ 3.21
CHD1O14646 TK2-213ENST00000563369 882 ntTSL 5 BASIC35.12■■■■□ 3.21
CHD1O14646 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC35.12■■■■□ 3.21
CHD1O14646 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CHD1O14646 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC35.11■■■■□ 3.21
CHD1O14646 DHDH-203ENST00000522614 776 ntTSL 5 BASIC35.11■■■■□ 3.21
CHD1O14646 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC35.11■■■■□ 3.21
CHD1O14646 AP006587.3-201ENST00000525742 1516 ntBASIC35.11■■■■□ 3.21
CHD1O14646 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC35.1■■■■□ 3.21
CHD1O14646 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC35.1■■■■□ 3.21
CHD1O14646 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC35.1■■■■□ 3.21
CHD1O14646 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CHD1O14646 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC35.09■■■■□ 3.21
CHD1O14646 RN7SL850P-201ENST00000579959 291 ntBASIC35.09■■■■□ 3.21
CHD1O14646 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CHD1O14646 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
CHD1O14646 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC35.09■■■■□ 3.21
CHD1O14646 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CHD1O14646 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC35.09■■■■□ 3.21
CHD1O14646 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC35.09■■■■□ 3.21
CHD1O14646 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC35.09■■■■□ 3.21
CHD1O14646 KLF2-202ENST00000592003 564 ntTSL 3 BASIC35.09■■■■□ 3.21
CHD1O14646 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CHD1O14646 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CHD1O14646 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CHD1O14646 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CHD1O14646 KRT18P35-201ENST00000510488 1269 ntBASIC35.08■■■■□ 3.21
CHD1O14646 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC35.08■■■■□ 3.21
CHD1O14646 AL121749.1-202ENST00000609313 2153 ntBASIC35.08■■■■□ 3.21
CHD1O14646 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC35.07■■■■□ 3.2
CHD1O14646 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC35.07■■■■□ 3.2
CHD1O14646 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC35.07■■■■□ 3.2
CHD1O14646 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC35.07■■■■□ 3.2
CHD1O14646 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CHD1O14646 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CHD1O14646 AL355472.2-201ENST00000422958 438 ntBASIC35.06■■■■□ 3.2
CHD1O14646 NME6-213ENST00000451657 871 ntTSL 2 BASIC35.06■■■■□ 3.2
CHD1O14646 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC35.06■■■■□ 3.2
CHD1O14646 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
CHD1O14646 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CHD1O14646 AC145676.1-201ENST00000514988 2004 ntBASIC35.06■■■■□ 3.2
CHD1O14646 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC35.06■■■■□ 3.2
CHD1O14646 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
CHD1O14646 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC35.06■■■■□ 3.2
CHD1O14646 AC133561.5-201ENST00000635547 218 ntBASIC35.06■■■■□ 3.2
CHD1O14646 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD1O14646 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD1O14646 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD1O14646 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC35.05■■■■□ 3.2
CHD1O14646 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC35.05■■■■□ 3.2
CHD1O14646 HLA-B-256ENST00000639848 1089 ntBASIC35.05■■■■□ 3.2
CHD1O14646 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD1O14646 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC35.05■■■■□ 3.2
CHD1O14646 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC35.04■■■■□ 3.2
CHD1O14646 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD1O14646 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC35.04■■■■□ 3.2
CHD1O14646 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC35.04■■■■□ 3.2
CHD1O14646 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC35.04■■■■□ 3.2
CHD1O14646 AL355075.4-201ENST00000554988 638 ntBASIC35.04■■■■□ 3.2
CHD1O14646 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD1O14646 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD1O14646 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD1O14646 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CHD1O14646 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC35.03■■■■□ 3.2
CHD1O14646 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CHD1O14646 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
CHD1O14646 LSM12P1-201ENST00000411836 588 ntBASIC35.03■■■■□ 3.2
CHD1O14646 KRT17P3-201ENST00000420566 1262 ntBASIC35.03■■■■□ 3.2
CHD1O14646 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC35.02■■■■□ 3.2
CHD1O14646 AC233702.5-201ENST00000584107 538 ntBASIC35.02■■■■□ 3.2
CHD1O14646 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC35.02■■■■□ 3.2
CHD1O14646 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
CHD1O14646 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CHD1O14646 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CHD1O14646 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
CHD1O14646 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CHD1O14646 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC35.01■■■■□ 3.2
CHD1O14646 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.19
CHD1O14646 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
CHD1O14646 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC35.01■■■■□ 3.19
CHD1O14646 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
CHD1O14646 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC35.01■■■■□ 3.19
CHD1O14646 AL591742.1-201ENST00000604433 565 ntBASIC35.01■■■■□ 3.19
CHD1O14646 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
CHD1O14646 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CHD1O14646 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CHD1O14646 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CHD1O14646 H19-210ENST00000439725 1929 ntTSL 2 BASIC35■■■■□ 3.19
CHD1O14646 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC35■■■■□ 3.19
CHD1O14646 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC35■■■■□ 3.19
CHD1O14646 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
CHD1O14646 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CHD1O14646 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CHD1O14646 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC34.99■■■■□ 3.19
CHD1O14646 AC097493.4-201ENST00000641197 219 ntBASIC34.99■■■■□ 3.19
CHD1O14646 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CHD1O14646 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC34.99■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms