Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDX4O14627 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.75■□□□□ 0.91
CDX4O14627 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.75■□□□□ 0.91
CDX4O14627 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDX4O14627 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.75■□□□□ 0.91
CDX4O14627 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.75■□□□□ 0.91
CDX4O14627 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDX4O14627 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDX4O14627 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.75■□□□□ 0.91
CDX4O14627 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDX4O14627 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.75■□□□□ 0.91
CDX4O14627 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDX4O14627 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.75■□□□□ 0.91
CDX4O14627 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.74■□□□□ 0.91
CDX4O14627 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 AP006587.3-201ENST00000525742 1516 ntBASIC20.74■□□□□ 0.91
CDX4O14627 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDX4O14627 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.74■□□□□ 0.91
CDX4O14627 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.74■□□□□ 0.91
CDX4O14627 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.74■□□□□ 0.91
CDX4O14627 OR7E47P-201ENST00000546390 1422 ntBASIC20.74■□□□□ 0.91
CDX4O14627 ABCB10P4-201ENST00000566803 2184 ntBASIC20.74■□□□□ 0.91
CDX4O14627 AL034346.1-201ENST00000568244 1277 ntBASIC20.74■□□□□ 0.91
CDX4O14627 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDX4O14627 AC008175.2-201ENST00000612840 297 ntBASIC20.74■□□□□ 0.91
CDX4O14627 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDX4O14627 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CDX4O14627 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDX4O14627 LINC01960-201ENST00000563759 1884 ntBASIC20.73■□□□□ 0.91
CDX4O14627 RBM17P2-201ENST00000616397 1405 ntBASIC20.73■□□□□ 0.91
CDX4O14627 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDX4O14627 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.73■□□□□ 0.91
CDX4O14627 ECEL1P3-201ENST00000427961 737 ntBASIC20.73■□□□□ 0.91
CDX4O14627 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.73■□□□□ 0.91
CDX4O14627 AC008403.3-201ENST00000598924 454 ntBASIC20.73■□□□□ 0.91
CDX4O14627 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.73■□□□□ 0.91
CDX4O14627 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.73■□□□□ 0.91
CDX4O14627 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.73■□□□□ 0.91
CDX4O14627 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDX4O14627 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
CDX4O14627 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDX4O14627 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.72■□□□□ 0.91
CDX4O14627 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.72■□□□□ 0.91
CDX4O14627 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.72■□□□□ 0.91
CDX4O14627 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDX4O14627 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDX4O14627 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDX4O14627 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
CDX4O14627 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDX4O14627 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.71■□□□□ 0.91
CDX4O14627 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CDX4O14627 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.71■□□□□ 0.91
CDX4O14627 MIR4497-201ENST00000583208 89 ntBASIC20.71■□□□□ 0.91
CDX4O14627 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.71■□□□□ 0.91
CDX4O14627 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDX4O14627 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 MIR718-201ENST00000390190 70 ntBASIC20.7■□□□□ 0.9
CDX4O14627 MIR1224-201ENST00000408193 85 ntBASIC20.7■□□□□ 0.9
CDX4O14627 POU5F1P4-201ENST00000413175 1085 ntBASIC20.7■□□□□ 0.9
CDX4O14627 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CDX4O14627 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.7■□□□□ 0.9
CDX4O14627 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.7■□□□□ 0.9
CDX4O14627 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.7■□□□□ 0.9
CDX4O14627 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.7■□□□□ 0.9
CDX4O14627 AC073912.3-201ENST00000624414 853 ntBASIC20.7■□□□□ 0.9
CDX4O14627 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.7■□□□□ 0.9
CDX4O14627 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CDX4O14627 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDX4O14627 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms