Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPEO14579 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPEO14579 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
COPEO14579 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
COPEO14579 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPEO14579 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.23■□□□□ 0.99
COPEO14579 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPEO14579 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPEO14579 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.23■□□□□ 0.99
COPEO14579 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPEO14579 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COPEO14579 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COPEO14579 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 MIR6724-1-201ENST00000616420 92 ntBASIC21.22■□□□□ 0.99
COPEO14579 MIR6724-2-201ENST00000616483 92 ntBASIC21.22■□□□□ 0.99
COPEO14579 MIR6724-4-201ENST00000617390 92 ntBASIC21.22■□□□□ 0.99
COPEO14579 MIR6724-3-201ENST00000622482 92 ntBASIC21.22■□□□□ 0.99
COPEO14579 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.22■□□□□ 0.99
COPEO14579 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.22■□□□□ 0.99
COPEO14579 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COPEO14579 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPEO14579 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.21■□□□□ 0.99
COPEO14579 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COPEO14579 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COPEO14579 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COPEO14579 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
COPEO14579 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COPEO14579 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COPEO14579 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COPEO14579 AC087239.1-201ENST00000622671 572 ntBASIC21.21■□□□□ 0.99
COPEO14579 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COPEO14579 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COPEO14579 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COPEO14579 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COPEO14579 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
COPEO14579 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.2■□□□□ 0.98
COPEO14579 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COPEO14579 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.2■□□□□ 0.98
COPEO14579 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.2■□□□□ 0.98
COPEO14579 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
COPEO14579 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
COPEO14579 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COPEO14579 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPEO14579 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
COPEO14579 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.2■□□□□ 0.98
COPEO14579 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.2■□□□□ 0.98
COPEO14579 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COPEO14579 LINC01006-201ENST00000333319 2292 ntBASIC21.19■□□□□ 0.98
COPEO14579 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.19■□□□□ 0.98
COPEO14579 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.19■□□□□ 0.98
COPEO14579 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
COPEO14579 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPEO14579 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
COPEO14579 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 AL049796.1-201ENST00000565336 1766 ntBASIC21.18■□□□□ 0.98
COPEO14579 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.18■□□□□ 0.98
COPEO14579 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.18■□□□□ 0.98
COPEO14579 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.18■□□□□ 0.98
COPEO14579 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
COPEO14579 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.18■□□□□ 0.98
COPEO14579 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
COPEO14579 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COPEO14579 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.17■□□□□ 0.98
COPEO14579 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
COPEO14579 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.17■□□□□ 0.98
COPEO14579 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms