Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
AP3B1O00203 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
AP3B1O00203 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AP3B1O00203 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.49■■□□□ 1.03
AP3B1O00203 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP3B1O00203 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
AP3B1O00203 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP3B1O00203 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
AP3B1O00203 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP3B1O00203 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP3B1O00203 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.48■■□□□ 1.03
AP3B1O00203 AC099791.1-201ENST00000416440 715 ntBASIC21.48■■□□□ 1.03
AP3B1O00203 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
AP3B1O00203 AL355001.2-201ENST00000620617 1191 ntBASIC21.48■■□□□ 1.03
AP3B1O00203 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
AP3B1O00203 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
AP3B1O00203 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
AP3B1O00203 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.48■■□□□ 1.03
AP3B1O00203 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.47■■□□□ 1.03
AP3B1O00203 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.47■■□□□ 1.03
AP3B1O00203 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.47■■□□□ 1.03
AP3B1O00203 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.47■■□□□ 1.03
AP3B1O00203 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.47■■□□□ 1.03
AP3B1O00203 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.47■■□□□ 1.03
AP3B1O00203 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.47■■□□□ 1.03
AP3B1O00203 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.47■■□□□ 1.03
AP3B1O00203 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.47■■□□□ 1.03
AP3B1O00203 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.47■■□□□ 1.03
AP3B1O00203 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.47■■□□□ 1.03
AP3B1O00203 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
AP3B1O00203 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
AP3B1O00203 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
AP3B1O00203 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.46■■□□□ 1.03
AP3B1O00203 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.46■■□□□ 1.03
AP3B1O00203 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
AP3B1O00203 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
AP3B1O00203 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
AP3B1O00203 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
AP3B1O00203 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.46■■□□□ 1.03
AP3B1O00203 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.46■■□□□ 1.03
AP3B1O00203 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.46■■□□□ 1.03
AP3B1O00203 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
AP3B1O00203 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.46■■□□□ 1.03
AP3B1O00203 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
AP3B1O00203 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
AP3B1O00203 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
AP3B1O00203 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 FEM1AP4-201ENST00000443167 1987 ntBASIC21.45■■□□□ 1.02
AP3B1O00203 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
AP3B1O00203 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
AP3B1O00203 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.45■■□□□ 1.02
AP3B1O00203 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.45■■□□□ 1.02
AP3B1O00203 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.45■■□□□ 1.02
AP3B1O00203 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.45■■□□□ 1.02
AP3B1O00203 RASA4CP-201ENST00000424092 1398 ntBASIC21.45■■□□□ 1.02
AP3B1O00203 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
AP3B1O00203 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
AP3B1O00203 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
AP3B1O00203 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
AP3B1O00203 AC105233.4-201ENST00000642045 216 ntBASIC21.44■■□□□ 1.02
AP3B1O00203 AL137060.1-201ENST00000618151 2648 ntBASIC21.44■■□□□ 1.02
AP3B1O00203 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
AP3B1O00203 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
AP3B1O00203 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.44■■□□□ 1.02
AP3B1O00203 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
AP3B1O00203 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.44■■□□□ 1.02
AP3B1O00203 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
AP3B1O00203 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
AP3B1O00203 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
AP3B1O00203 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.43■■□□□ 1.02
AP3B1O00203 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
AP3B1O00203 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
AP3B1O00203 AC091305.1-201ENST00000479476 895 ntBASIC21.43■■□□□ 1.02
AP3B1O00203 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.43■■□□□ 1.02
AP3B1O00203 AP001330.3-201ENST00000520123 633 ntBASIC21.43■■□□□ 1.02
AP3B1O00203 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.43■■□□□ 1.02
AP3B1O00203 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms