Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L2-201ENST00000561772 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L6-201ENST00000626483 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L1-201ENST00000627662 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L8-201ENST00000629013 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L3-201ENST00000630187 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L7-201ENST00000630678 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DUX4L5-201ENST00000630834 1275 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 FAM99A-202ENST00000538190 1989 ntBASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV4S1A1TA0A5B7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 KRT18P5-201ENST00000436075 1291 ntBASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CCDC92B-201ENST00000575506 885 ntBASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV4S1A1TA0A5B7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 KRT18P14-201ENST00000534205 1250 ntBASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC026310.3-201ENST00000625186 2373 ntBASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV4S1A1TA0A5B7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms