Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV34A0A0B4J273 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV34A0A0B4J273 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 AC010980.1-201ENST00000587192 1142 ntBASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 AC005703.6-201ENST00000623265 1329 ntBASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV34A0A0B4J273 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 LINC01006-201ENST00000333319 2292 ntBASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV34A0A0B4J273 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV34A0A0B4J273 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 AC026471.6-201ENST00000622954 1905 ntBASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms