Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC099791.1-201ENST00000416440 715 ntBASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC110285.6-201ENST00000617652 491 ntBASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 Z98882.1-201ENST00000622160 2253 ntBASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.63■□□□□ 0.41
IGHV3-43A0A0B4J1X8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AL034346.1-201ENST00000568244 1277 ntBASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC104564.3-201ENST00000582367 638 ntBASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC106739.1-201ENST00000617035 715 ntBASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC005229.4-201ENST00000610085 2198 ntBASIC17.62■□□□□ 0.41
IGHV3-43A0A0B4J1X8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 IGHV3-19-201ENST00000521488 291 ntBASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV3-43A0A0B4J1X8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SMUG1P1-201ENST00000590640 811 ntBASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 TSPY26P-201ENST00000476365 1326 ntBASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 AF106564.1-201ENST00000607058 2553 ntBASIC17.6■□□□□ 0.41
IGHV3-43A0A0B4J1X8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms