Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NXPE1-205ENST00000536312 2006 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 AP000787.1-206ENST00000543150 1567 ntTSL 5 BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 RBM24-201ENST00000318204 2394 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
NPIPA3F8WFD2 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 PPP1CC-204ENST00000546933 2154 ntTSL 3 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 ACKR1-204ENST00000537147 1902 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AL583844.1-201ENST00000424229 1724 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC112200.2-201ENST00000624673 1739 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 MASTL-202ENST00000375940 3080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 APOL4-202ENST00000332987 1825 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 IL36A-201ENST00000259211 888 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 COX17-201ENST00000261070 684 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 Metazoa_SRP.1-201ENST00000360440 343 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AL365366.1-201ENST00000414898 853 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 RTN2-203ENST00000430715 1127 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC011995.1-201ENST00000437610 578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 CFL1P2-201ENST00000440986 684 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 KRTAP21-4P-201ENST00000454921 816 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AADACP1-203ENST00000471766 707 ntTSL 3 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 SOX2-OT-212ENST00000491282 882 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC093871.1-201ENST00000503815 534 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 RBMXP4-201ENST00000507797 1134 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC079385.2-201ENST00000547531 863 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC132872.1-201ENST00000566986 1195 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC069366.2-201ENST00000583643 430 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC003005.2-201ENST00000595422 539 ntTSL 4 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC131055.2-201ENST00000610586 248 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 ZNF646P1-201ENST00000621811 995 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC008993.1-201ENST00000632280 776 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AL138921.3-201ENST00000636357 992 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 ARHGEF9-213ENST00000624210 1888 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 LINC00852-201ENST00000475197 1328 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 MAGEC3-201ENST00000298296 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 DDO-201ENST00000368923 1953 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 FBXO3-202ENST00000448981 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 MANBA-201ENST00000226578 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 PRAMEF6-201ENST00000376189 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 PRAMEF6-202ENST00000415464 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 PRAMEF5-201ENST00000622421 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 AC026469.1-201ENST00000621095 3306 ntBASIC10.5□□□□□ -0.73
NPIPA3F8WFD2 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RFPL2-202ENST00000248983 1474 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AC007741.1-201ENST00000623818 3495 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AL645568.1-201ENST00000367716 1815 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MS4A14-209ENST00000531787 2537 ntTSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 SLC7A11-AS1-202ENST00000510767 4654 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RSPH3-203ENST00000449822 1904 ntTSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 MYO7A-203ENST00000409893 4050 ntTSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 SEMA4D-211ENST00000438547 4824 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 ADCY4-204ENST00000554068 3404 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 RESP18-202ENST00000392083 626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AC068631.2-201ENST00000418776 501 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 DLEC1P1-201ENST00000427139 576 ntBASIC10.49□□□□□ -0.73
NPIPA3F8WFD2 AL356488.1-201ENST00000429752 609 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 545.1 ms