Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AC027020.2-201ENST00000602585 2389 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 LYAR-202ENST00000452476 1468 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 PITRM1-202ENST00000380989 3487 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 TP53-213ENST00000510385 2404 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 TP53-223ENST00000618944 2404 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 ATP6V1G2-206ENST00000376151 1261 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 MT1P3-201ENST00000421424 177 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 GAMTP2-201ENST00000430917 463 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AC010275.1-201ENST00000504081 565 ntTSL 4 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AC090820.1-201ENST00000519722 591 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 SEC14L3-207ENST00000540910 2113 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 IL32-229ENST00000549213 654 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 RN7SL491P-201ENST00000584748 269 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 ZNF177-203ENST00000590616 612 ntTSL 3 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 MIR6750-201ENST00000617817 75 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 MED15P1-202ENST00000620166 906 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AL117190.3-201ENST00000621821 87 ntBASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 MFSD4A-201ENST00000367147 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 POP1-201ENST00000349693 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 COX15-201ENST00000016171 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 AC073529.1-201ENST00000608176 1549 ntTSL 5 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LMO3Q8TAP4 TLR12P-201ENST00000413515 2706 ntBASIC12.15□□□□□ -0.47
LMO3Q8TAP4 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 CTAGE4-201ENST00000486333 2588 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 CTAGE8-201ENST00000487179 2588 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 TPI1P2-202ENST00000635637 2017 ntBASIC12.15□□□□□ -0.47
LMO3Q8TAP4 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LMO3Q8TAP4 HACL1-201ENST00000321169 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 INMT-MINDY4-202ENST00000458257 2877 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 MLC1-202ENST00000395876 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 C16orf62-201ENST00000251143 3894 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 UGT1A7-201ENST00000373426 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 ANAPC4-210ENST00000510092 2599 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 LY6D-201ENST00000301263 804 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 OR6K6-201ENST00000368144 1172 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 MRPL51P2-201ENST00000450190 376 ntBASIC12.14□□□□□ -0.47
LMO3Q8TAP4 GPR79-201ENST00000498175 868 ntBASIC12.14□□□□□ -0.47
LMO3Q8TAP4 NXF1-208ENST00000531131 1023 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AL359220.1-201ENST00000554086 781 ntTSL 3 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AC100827.1-201ENST00000569853 382 ntBASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AP000897.2-202ENST00000579332 821 ntTSL 3 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AC002401.4-201ENST00000612365 583 ntBASIC12.14□□□□□ -0.47
LMO3Q8TAP4 FP236240.4-201ENST00000624353 373 ntBASIC12.14□□□□□ -0.47
LMO3Q8TAP4 OR6K6-202ENST00000641861 1172 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 LIMCH1-210ENST00000509454 1506 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AC022710.1-201ENST00000560128 1781 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 ZNF503-AS1-201ENST00000416398 1860 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AC005702.1-202ENST00000586209 1603 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 SEMA4A-202ENST00000368282 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 DEF8-227ENST00000570182 3549 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LMO3Q8TAP4 AL049775.1-201ENST00000380722 2448 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 WDPCP-201ENST00000272321 3392 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZNF460-201ENST00000360338 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZNF625-202ENST00000439556 1322 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZNF596-203ENST00000398612 2863 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 PPFIA2-211ENST00000548586 4033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO3Q8TAP4 SLC35F4-201ENST00000339762 1779 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms