Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC10.51□□□□□ -0.73
P04436 LINC01395-201ENST00000631195 982 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 SMAD3-202ENST00000439724 1530 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 AC093915.1-201ENST00000605740 1543 ntBASIC10.51□□□□□ -0.73
P04436 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC10.51□□□□□ -0.73
P04436 ZNF438-205ENST00000436087 3164 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
P04436 AC234775.2-201ENST00000392722 1792 ntBASIC10.51□□□□□ -0.73
P04436 ZC3HC1-201ENST00000311873 2017 ntTSL 2 BASIC10.51□□□□□ -0.73
P04436 SLC22A16-201ENST00000330550 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 AC078925.3-201ENST00000623434 2500 ntBASIC10.51□□□□□ -0.73
P04436 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC10.51□□□□□ -0.73
P04436 EIF4BP7-201ENST00000432307 1813 ntBASIC10.51□□□□□ -0.73
P04436 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC10.51□□□□□ -0.73
P04436 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04436 SRRM5-202ENST00000607544 2698 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
P04436 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC10.5□□□□□ -0.73
P04436 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 GLP2R-201ENST00000262441 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 AURKA-207ENST00000395914 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 AL445647.1-201ENST00000606221 3599 ntBASIC10.5□□□□□ -0.73
P04436 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 NXPE1-205ENST00000536312 2006 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04436 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 SLC24A3-202ENST00000613834 3694 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P04436 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
P04436 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 SLC25A25-201ENST00000373064 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 MRPL55-203ENST00000336520 744 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
P04436 PLAUR-202ENST00000339082 1254 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 TPTE2P5-201ENST00000379515 450 ntTSL 5 BASIC10.5□□□□□ -0.73
P04436 STEAP1B-202ENST00000406890 1193 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 CATIP-AS2-201ENST00000411433 535 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 OR6V1-201ENST00000418316 1028 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04436 AL360181.2-201ENST00000424450 626 ntTSL 5 BASIC10.5□□□□□ -0.73
P04436 MRPL55-221ENST00000430433 864 ntTSL 5 BASIC10.5□□□□□ -0.73
P04436 AC008940.1-201ENST00000438117 785 ntTSL 5 BASIC10.5□□□□□ -0.73
P04436 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 AL627082.1-201ENST00000443847 235 ntBASIC10.5□□□□□ -0.73
P04436 ST3GAL5-AS1-201ENST00000455121 783 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 RN7SL110P-201ENST00000498222 283 ntBASIC10.5□□□□□ -0.73
P04436 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 AP000759.1-201ENST00000531086 397 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 FAM174B-206ENST00000555696 548 ntAPPRIS ALT2 TSL 4 BASIC10.5□□□□□ -0.73
P04436 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC10.5□□□□□ -0.73
P04436 AC124312.3-201ENST00000567527 1236 ntBASIC10.5□□□□□ -0.73
P04436 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 AC025211.1-201ENST00000582272 373 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 CAMK1G-202ENST00000361322 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
P04436 WRNIP1-201ENST00000380764 1557 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 ADGRG1-266ENST00000568908 3852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC10.5□□□□□ -0.73
P04436 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04436 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 ZNF185-209ENST00000449285 4328 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
P04436 AL354796.1-201ENST00000623292 1951 ntBASIC10.5□□□□□ -0.73
P04436 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P04436 AL138787.1-201ENST00000446354 1674 ntTSL 3 BASIC10.5□□□□□ -0.73
P04436 KIAA1683-206ENST00000600328 3819 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
P04436 NKIRAS1-205ENST00000421515 2018 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
P04436 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04436 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC10.5□□□□□ -0.73
P04436 PTPRN-204ENST00000423636 3313 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
P04436 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
P04436 ZNHIT6-201ENST00000370574 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 ZNF558-207ENST00000601372 7032 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P04436 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC10.49□□□□□ -0.73
P04436 PLA2G4C-201ENST00000354276 2496 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
P04436 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC10.49□□□□□ -0.73
P04436 NAGA-202ENST00000402937 1869 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P04436 OPRM1-209ENST00000435918 2217 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 AP000997.2-201ENST00000564619 8400 ntBASIC10.49□□□□□ -0.73
P04436 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P04436 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC10.49□□□□□ -0.73
P04436 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
P04436 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms