Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CSNK1G3Q9Y6M4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.9■□□□□ 0.94
CSNK1G3Q9Y6M4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CSNK1G3Q9Y6M4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1G3Q9Y6M4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.9■□□□□ 0.94
CSNK1G3Q9Y6M4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.89■□□□□ 0.94
CSNK1G3Q9Y6M4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSNK1G3Q9Y6M4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 C9orf163-202ENST00000624034 2573 ntBASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 TSPY6P-201ENST00000448518 926 ntBASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 EEF1DP3-203ENST00000566025 782 ntBASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 AC053503.5-201ENST00000601508 636 ntBASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSNK1G3Q9Y6M4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 AC010536.3-201ENST00000620306 533 ntBASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSNK1G3Q9Y6M4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 AP006587.3-201ENST00000525742 1516 ntBASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSNK1G3Q9Y6M4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 CNN2P6-201ENST00000439038 900 ntBASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSNK1G3Q9Y6M4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1G3Q9Y6M4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 AC133552.2-202ENST00000575694 574 ntBASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1G3Q9Y6M4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms