Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CYP46A1Q9Y6A2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 AC110285.6-201ENST00000617652 491 ntBASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CYP46A1Q9Y6A2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 EDA-201ENST00000338901 1233 ntBASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 AC027682.1-201ENST00000562846 899 ntBASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CYP46A1Q9Y6A2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 AC005229.4-201ENST00000610085 2198 ntBASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CYP46A1Q9Y6A2 AP006587.3-201ENST00000525742 1516 ntBASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 AP001330.3-201ENST00000520123 633 ntBASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CYP46A1Q9Y6A2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CYP46A1Q9Y6A2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 AL355001.2-201ENST00000620617 1191 ntBASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 TSPY26P-201ENST00000476365 1326 ntBASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.25■■□□□ 1.63
CYP46A1Q9Y6A2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 FEM1AP4-201ENST00000443167 1987 ntBASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.24■■□□□ 1.63
CYP46A1Q9Y6A2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms