Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 GCSHP5-201ENST00000443090 522 ntBASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 AC069236.1-201ENST00000604339 616 ntBASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
CDC42BPBQ9Y5S2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CDC42BPBQ9Y5S2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 AC091874.3-201ENST00000512672 1195 ntBASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 RBM17P2-201ENST00000616397 1405 ntBASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 KRT18P29-201ENST00000397031 1267 ntBASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CDC42BPBQ9Y5S2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CDC42BPBQ9Y5S2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC32.63■■■□□ 2.81
CDC42BPBQ9Y5S2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 AC010980.2-201ENST00000587099 1412 ntBASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 AL162412.1-201ENST00000567129 965 ntBASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC32.62■■■□□ 2.81
CDC42BPBQ9Y5S2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDC42BPBQ9Y5S2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
CDC42BPBQ9Y5S2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 KRT16P2-201ENST00000414673 1423 ntBASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDC42BPBQ9Y5S2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.58■■■□□ 2.81
CDC42BPBQ9Y5S2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC32.58■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms