Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 GUSBP5-202ENST00000510805 1989 ntBASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HRH3Q9Y5N1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 OR7E47P-201ENST00000546390 1422 ntBASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 BX005040.4-201ENST00000637145 1518 ntBASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HRH3Q9Y5N1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HRH3Q9Y5N1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HRH3Q9Y5N1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HRH3Q9Y5N1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HRH3Q9Y5N1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
HRH3Q9Y5N1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HRH3Q9Y5N1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.62■□□□□ 0.73
HRH3Q9Y5N1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms