Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA11Q9Y5H2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA11Q9Y5H2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 AP004607.7-201ENST00000527152 1677 ntBASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA11Q9Y5H2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 AC099791.1-201ENST00000416440 715 ntBASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 AL355001.2-201ENST00000620617 1191 ntBASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA11Q9Y5H2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 AC244015.2-201ENST00000616358 1861 ntBASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA11Q9Y5H2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 AP001330.3-201ENST00000520123 633 ntBASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA11Q9Y5H2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGA11Q9Y5H2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 AC104564.3-201ENST00000582367 638 ntBASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 SMUG1P1-201ENST00000590640 811 ntBASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 AL121603.2-201ENST00000557373 2117 ntBASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA11Q9Y5H2 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms